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. 2022 Apr 14;185(8):1308–1324.e23. doi: 10.1016/j.cell.2022.02.022
REAGENT/RESOURCE SOURCE IDENTIFIER
Antibodies

Rabbit anti-Oskar (1:3000; WB & IF) In-house N/A
Rabbit anti-Hrp48 (1:2000; WB) In-house N/A
Rabbit anti-Bruno (1:1000; WB & 1:3000 IF) In-house N/A
Rabbit anti-PTB (1:2000; WB) In-house N/A
Rabbit anti-EGFP (1:5000; WB) Torrey Pines Biolabs Cat# TP401; RRID:AB_10890443
Rabbit anti-Histone H3 (1:2500; WB) Abcam Cat# ab1791; RRID:AB_302613
Rat anti-Vasa (1:500; IF) In-house N/A
Mouse anti-Even-skipped (1:500; IF) Gift of Justin Crocker DSHB 2B8

Chemicals

1,6-Hexanediol Sigma Cat# 240117
Colchicine Sigma Cat# C9754
Insulin Sigma Cat# I9278
Fetal Bovine Serum (FBS) Life Technologies Cat# 10082147
Schneider’s Drosophila medium Life Technologies Cat# 21720024
SumoStar protease Life Sensors Cat# 4110
PEG-4000 Thermo Scientific Cat# EL0011
ATP Thermo Scientific Cat# R0441
RNase A Thermo Scientific Cat# EN0531
Benzonase Sigma Cat# E1014
Tetramethyl Rhodamine BSA Thermo Scientific Cat# A23016
Shandon ImmuMount Thermo Scientific Cat# 9990402

Critical commercial assays

Effectene Transfection reagent Qiagen Cat# 301425
X-tremeGENE HP DNA Transfection reagent Roche Cat# 06 366 236 001
MEGAscript T7 transcription kit Thermo Scientific Cat# AMB13345
StrepTrap HP Merck Cat# GE28-9075-47
HisTrap HP Merck Cat# GE17-5248-01
HiLoad 16/600 Superdex 200pg Merck Cat# GE28-9893-35

Plasmids

pFastBAC 1-mRFP-PTB This study N/A
pCoofy63-BrunoFL-EGFP This study N/A
pCoofy63-BrunoΔN -EGFP This study N/A
pCoofy63-Hrp48FL-EGFP This study N/A
pCoofy63-Hrp48ΔC -EGFP This study N/A
UASp-attB-K10-Bruno FL-EGFP This study N/A
UASp-attB-K10-Bruno ΔN-EGFP This study N/A
pU6-BbsI-chiRNA Gratz et al. (2013) Addgene Cat# 45946
pHD-scarless dsRED Kate O'Connor-Giles Addgene Cat# 64703
UASp-attB-K10-EGFP-Hrp48FL This study N/A
UASp-attB-K10-EGFP-Hrp48ΔC This study N/A
pHsp83-NLS-HA-tdMCP-2xEGFP This study N/A
Dendra2-FUS WT Patel et al. (2015) N/A
pHsp83-NLS-HA-tdMCP-EGFP-FUS LC This study N/A
MBP-FUS FL-12E Monahan et al. (2017) Addgene Cat# 98652
pHsp83-NLS-HA-tdMCP-EGFP-FUS LC 12E This study N/A
pActin5C-Bruno FL-EGFP This study N/A
pActin5C-Bruno ΔN -EGFP This study N/A
Oligonucleotide probes smFISH probes are listed in supplementary figure legends S2 (oskar) and S5 (gurken, bicoid) Gáspár et al., (2017b) N/A

Fly strains (D. melanogaster)

w1118 BDSC BDSC Cat# 3605; RRID:BDSC_3605
oskar6xMS2/CyO Lin et al. (2008) N/A
oskar6xMS2:MCP-EGFP/Tm3Sb Lin et al. (2008) N/A
mRFP-Nup107 Hampoelz et al. (2019) N/A
w[1118]; PBac{y[+mDint2] GFP[E.3xP3]=vas-Cas9}VK00027 BDSC BDSC Cat# 51324; RRID:BDSC_51324
y[1] M{vas-int.Dm}ZH-2A w[]; PBac{y[+]-attP-3B}VK00033 BDSC BDSC Cat# 24871; RRID:BDSC_24871
vas-phi-ZH2A, PBac{y[+]-attP-9A}VK00018 BDSC BDSC Cat# 9736; RRID:BDSC_9736
aretCRISPR-dsRED/CyO This study N/A
If/CyO; UASp-BrunoFL-EGFP/Tm3ser This study N/A
If/CyO; UASp-BrunoΔN-EGFP/Tm3ser This study N/A
bruno-RNAi : P{TRiP.HMC02374}attP2 BDSC BDSC Cat# 44483; RRID:BDSC_51324
hrp48-RNAi : P{TRiP.JF01478}attP2 BDSC BDSC Cat# 31685; RRID:BDSC_51324
ptb-RNAi : P{TRiP.GLV21034}attP2 BDSC BDSC Cat# 35669; RRID:BDSC_51324
If/CyO; UASp- EGFP-Hrp48FL- /Tm3ser This study N/A
If/CyO; UASp- EGFP-Hrp48ΔC- /Tm3ser This study N/A
PTB-EGFP trap : w-;Bl/CyO;GFP-PTB/TM6b Besse et al. (2009) N/A
Bruno-EGFP trap : w-; GFP-Bruno/CyO BDSC BDSC Cat# 60144; RRID:BDSC_51324
pHsp83-MCP-2xEGFP/CyO This study N/A
pHsp83-MCP-EGFP-FUS LC/CyO This study N/A
If/CyO; pHsp83-MCP-EGFP-FUS LC 12E/Tm3ser This study N/A
oskarGAL4/Tm3sb BDSC BDSC Cat# 44242; RRID:BDSC_51324
oskarA87 Jenny et al. (2006) N/A
oskarattP,3P3GFP Gáspár et al., (2017a) N/A
oskar84 Lehmann and Nusslein-Volhard (1986) N/A
Df3RpXT103 Lehmann and Nusslein-Volhard (1986) N/A

Software

Fiji Schindelin et al. (2012) https://fiji.sc
xsPT Fiji plugin Gaspar and Ephrussi (2017) https://github.com/Xaft/xs/blob/master/_xs.jar
Cort Analysis Fiji plugin Gaspar et al. (2014) N/A
Imaris Bitplane https://imaris.oxinst.com
Huygens Essential Scientific Volume Imaging, Hilversum, the Netherlands https://svi.nl/Huygens-Deconvolution
FRAP Analyser Halavatyi and Terjung (2017) https://github.com/ssgpers/FRAPAnalalyser
PLAAC Lancaster et al. (2014) http://plaac.wi.mit.edu/
IUPred Mészáros et al., (2018) https://iupred2a.elte.hu
IMOD v.4.9 Kremer et al. (1996) https://bio3d.colorado.edu/imod/
TOM package Nickell et al. (2005) MATLAB (MathWorks)
SerialEM v3.7.2 Mastronarde (2005) https://bio3d.colorado.edu/SerialEM/
WARP Tegunov and Cramer (2019) http://www.warpem.com/warp/
Prism 8.0 GraphPad https://www.graphpad.com/
JalView 2.11.1.3 Waterhouse et al. (2009) http://www.jalview.org
BioRender.com Graphical Abstract created with BioRender.com https://biorender.com

td: tandem, BDSC: Bloomington Drosophila Stock Center, DSHB: Developmental Studies Hybridoma Bank.