Table 1. Number of specimens belonging to 19 insect orders from Pakistan with DNA barcode records. The number of families, genera, species, and BINs is reported for each order.
Order | Specimens with barcodes | Specimens assigned to BINs (%) | BINs recovered | OTUs without BIN* |
Singleton BINs (%) | BINs assigned to family (%) | Families recovered |
BINs assigned to genus (%) | Genera recovered | BINs assigned to species (%) | Species recovered |
---|---|---|---|---|---|---|---|---|---|---|---|
Blattodea | 64 | 84 | 19 | 5 | 36.8 | 100 | 5 | 78.9 | 9 | 52.6 | 10 |
Coleoptera | 3,889 | 93 | 819 | 123 | 45.2 | 100 | 56 | 21.9 | 118 | 13.3 | 119 |
Dermaptera | 24 | 83.3 | 3 | 2 | 33.3 | 100 | 2 | 33.3 | 1 | 0.0 | 0 |
Diptera | 20,095 | 99 | 1,684 | 94 | 40.1 | 99.0 | 68 | 29.8 | 212 | 13.8 | 222 |
Embioptera | 28 | 96.4 | 7 | 1 | 14.3 | 100 | 2 | 14.3 | 1 | 14.3 | 1 |
Hemiptera | 5,859 | 96.5 | 642 | 73 | 41.9 | 98.3 | 59 | 31.6 | 132 | 22.6 | 135 |
Hymenoptera | 10,542 | 96 | 1,711 | 177 | 47.7 | 99.4 | 50 | 34.7 | 226 | 10.2 | 170 |
Lepidoptera | 6,064 | 99.4 | 1,233 | 24 | 42.5 | 99.6 | 62 | 71.9 | 516 | 41.5 | 514 |
Mantodea | 113 | 97.3 | 36 | 2 | 50.0 | 100 | 2 | 13.9 | 4 | 5.6 | 2 |
Megaloptera | 6 | 100 | 1 | 0 | 0.0 | 100 | 1 | 100 | 1 | 100 | 1 |
Neuroptera | 559 | 92.3 | 99 | 6 | 39.4 | 99.0 | 7 | 54.5 | 30 | 36.4 | 32 |
Odonata | 353 | 92.6 | 51 | 11 | 21.6 | 100 | 12 | 92.2 | 30 | 88.2 | 47 |
Orthoptera | 1,409 | 97.59 | 163 | 21 | 30.1 | 100 | 12 | 44.2 | 53 | 37.4 | 54 |
Phasmatodea | 4 | 75 | 3 | 1 | 100.0 | 100 | 1 | 0.0 | 0 | 0.0 | 0 |
Psocodea | 950 | 97.5 | 31 | 5 | 22.6 | 93.5 | 13 | 38.7 | 10 | 19.4 | 6 |
Strepsiptera | 2 | 100 | 1 | 0 | 0.0 | 100 | 1 | 100 | 1 | 0.0 | 0 |
Thysanoptera | 618 | 99.3 | 76 | 2 | 34.2 | 100 | 3 | 80.3 | 27 | 69.7 | 48 |
Trichoptera | 11 | 100 | 10 | 0 | 90.0 | 100 | 6 | 60.0 | 4 | 40.0 | 4 |
Zygentoma | 2 | 100 | 1 | 0 | 0.0 | 0.0 | 0 | 0.0 | 0 | 0.0 | 0 |
Total | 50,592 | 97.6% | 6,590 | 547 | 42.9% | 99% | 362 | 40% | 1,375 | 21% | 1,364 |
Note:
For recognition as a new BIN, a sequence must include >500 bp of the barcode region (positions 70 bp to 700 bp in the BOLD alignment) and possess <1% ambiguous bases.