TABLE 1.
Isolate | Species | MLSTa | Collection date | Age/sex | Specimen type | Ward | Prognosis | Conjugation frequency | NDM-type | Plasmid type carrying blaNDM | NDM-positive plasmid size (kb) | Grouping of IncX3 blaNDM-positive plasmids |
---|---|---|---|---|---|---|---|---|---|---|---|---|
KP-13-8 | K. pneumoniae | ST494 | 2013.01.06 | 61yr/female | blood | Gastroenterology dept | discharge | -b | NDM-5 | IncX3 | 46 | B |
EC-13-1 | E. coli | ST40 | 2013.01.25 | 6days/male | blood | ICU | discharge | - | NDM-1 | IncX3 | 54 | B |
KP-13-11 | K. pneumoniae | ST35 | 2013.04.25 | 2mo/female | sputum | ICU | death | 3.6 × 10−4 | NDM-1 | IncX3 | 54 | C |
CR-13-12 | E. hormaechei | ST419 | 2013.05.06 | 89yr/female | sputum | ICU | discharge | 3.3 × 10−4 | NDM-1 | IncFII | 87 | - |
EC-13-22 | E. coli | ST361 | 2013.08.05 | 41yr/female | drainage liquid | gynecology | discharge | 2.6 × 10−6 | NDM-1 | IncC | 213 | - |
EC-13-31 | E. coli | ST167 | 2013.09.04 | 68yr/male | blood | gynecology | discharge | - | NDM-5 | IncX3 | 46 | B |
ECL-13-2 | E. hormaechei | ST177 | 2013.09.04 | 53yr/female | urine | urology | discharge | 1.8 × 10−7 | NDM-1 | IncFII-IncFIB | 138 | - |
EC-13-30 | E. coli | ST167 | 2013.09.18 | 35yr/male | secreta | endocrinology | discharge | - | NDM-5 | IncX3 | 46 | B |
KP-13-7 | K. pneumoniae | ST1 | 2013.09.26 | 37yr/male | bile | hepatological surgery | discharge | 1.33 × 10−4 | NDM-1 | IncX3 | 54 | C |
EC-13-33 | E. coli | ST540 | 2013.10.06 | 68yr/male | blood | gynecology | discharge | 3 × 10−4 | NDM-1 | IncFII-IncN | 78 | - |
ECL-13-4 | E. hormaechei | ST88 | 2013.10.17 | 48yr/male | blood | ICU | death | 2.8*10−4 | NDM-5 | IncX3 | 46 | B |
CF-13-34 | C. portucalensis | ST328 | 2013.10.19 | 23yr/male | secreta | hematology | death | 1.1 × 10−4 | NDM-1 | IncX3 | 54 | E |
EC-13-49 | E. coli | ST167 | 2013.11.07 | 78yr/female | urine | kidney internal | discharge | 3.5 × 10−6 | NDM-1 | IncC | 215 | - |
ECL-13-37 | E. hormaechei | ST231 | 2013.11.14 | 37yr/male | urine | urology | discharge | - | NDM-5 | IncX3 | 46 | B |
KP-13-14 | K. pneumoniae | ST782 | 2013.11.23 | 21days/male | wound | pediatric surgery | discharge | - | NDM-9 | IncHI5 | 358 | - |
CR-13-36 | E. hormaechei | ST419 | 2013.12.05 | 47yr/female | urine | kidney internal | discharge | 1.2 × 10−5 | NDM-1 | IncFII | 87 | - |
PM58 | P. mirabilis | NA | 2013.12.15 | 3yr/female | urine | rehabilitation medicine | discharge | 9.4 × 10−6 | NDM-1 | - | 85 | - |
KP-14-2-131 | K. pneumoniae | ST345 | 2014.01.23 | 44yr/male | urine tube tip | neurosurgery | discharge | 1.4 × 10−6 | NDM-1 | IncHI5 | 358 | - |
KOR-14-72 | R. ornithinolytica | NA | 2014.02.15 | 71yr/female | sputum | ICU | discharge | 3.9 × 10−5 | NDM-1 | IncX3 | 46 | C |
KO-14-71 | K. pasteurii | NA | 2014.02.20 | 67yr/female | sputum | ICU | discharge | 3.2 × 10−3 | NDM-1 | IncX3 | 54 | C |
EC-14-2-77 | E. coli | ST410 | 2014.03.30 | 66yr/male | drainage liquid | hepatological surgery | discharge | 2.5 × 10−3 | NDM-4 | IncX3 | 54 | C |
ECL-14-58 | E. hormaechei | ST177 | 2014.05.12 | 10yr/male | pus | pediatric surgery | discharge | 9.5 × 10−5 | NDM-1 | IncX3 | 54 | C |
ECL-14-60 | E. hormaechei | ST696 | 2014.06.05 | 62yr/male | blood | ICU | death | - | NDM-1 | IncC, IncX3 | 171-54 | D |
EC-14-55 | E. coli | ST410 | 2014.06.06 | 14yr/female | blood | Pediatric medicine | death | - | NDM-4 | IncX3 | 46 | C |
KA-14-61 | K. aerogenes | NA | 2014.08.30 | 33yr/male | secreta | Department of Burn Repair and Reconstruction | discharge | 2.2 × 10−4 | NDM-1 | IncX3 | 46 | B |
EC-14-54 | E. coli | ST167 | 2014.08.30 | 51yr/male | sanies | intestine surgery | discharge | - | NDM-5 | IncX3 | 46 | B |
CF-14-50 | C. freundii | ST22 | 2014.09.20 | 44yr/male | urine | urology | discharge | 1.9 × 10−4 | NDM-1 | IncX3 | 54 | D |
ECL-14-56 | E. hormaechei | ST171 | 2014.11.02 | 45yr/male | blood | ICU | death | - | NDM-1 | IncX3 | 54 | C |
KP-14-6 | K. pneumoniae | ST76 | 2014.11.13 | 10days/female | blood | Infectious disease | discharge | 2.9 × 10−4 | NDM-1 | IncC | 200 | - |
EC-14-2-134 | E. coli | ST101 | 2014.11.17 | 31yr/male | swab | Burn Repair and Reconstruction | discharge | 5.9 × 10−5 | NDM-5 | IncX3 | 46 | B |
EC-14-2-92 | E. coli | ST167 | 2014.11.27 | 50yr/male | blood | oncology | death | 4 × 10−5 | NDM-5 | IncX3 | 46 | B |
EC-14-2-94 | E. coli | ST167 | 2014.12.10 | 44yr/female | urine | urology | discharge | - | NDM-5 | IncX3 | 46 | B |
EC-14-2-9 | E. coli | ST167 | 2014.12.19 | 51yr/female | sputum | Rheumatology | discharge | - | NDM-5 | IncX3 | 46 | B |
EC-15-2-5 | E. coli | ST167 | 2015.01.16 | 26yr/male | sputum | ICU | death | - | NDM-5 | IncX3 | 54 | D |
EC-15-2-14 | E. coli | ST2083 | 2015.01.25 | 23yr/female | sputum | Rheumatology | discharge | - | NDM-5 | IncX3 | 46 | B |
CF-15-43 | C. portucalensis | ST17 | 2015.02.21 | 47yr/female | urine | urology | discharge | 3 × 10−5 | NDM-1 | IncX3 | 54 | E |
CF-15-2-98 | C. portucalensis | ST17 | 2015.02.21 | 47yr/female | urine | urology | discharge | 6.8 × 10−5 | NDM-1 | IncX3 | 54 | E |
KP-15-2-113 | K. pneumoniae | ST1083 | 2015.03.08 | 2mo/male | sputum | neonatology | discharge | 3.3 × 10−5 | NDM-1 | IncX3 | 46 | C |
EC-15-10 | E. coli | ST540 | 2015.03.14 | 74yr/male | sputum | ICU | discharge | - | NDM-5 | IncX3 | 54 | D |
EC-15-3 | E. coli | ST6388 | 2015.03.23 | 53yr/female | urine | urology | discharge | - | NDM-1 | IncFII | 110 | - |
CF-15-61 | C. freundii | ST22 | 2015.04.08 | 75yr/female | drainage liquid | gastrointestinal surgery | discharge | 1.7 × 10−4 | NDM-1 | IncX3 | 54 | C |
CF-15-33 | C. freundii | NA | 2015.05.20 | 7yr/male | blood | Pediatric medicine | discharge | 1.7 × 10−5 | NDM-1 | IncX3 | 54 | C |
EC-15-34 | E. coli | ST746 | 2015.05.22 | 60yr/male | blood | urology | death | - | NDM-5 | IncX3 | 46 | B |
KP-15-35 | K. pneumoniae | ST17 | 2015.05.22 | 10days/male | blood | neonatology | death | 1.4 × 10−5 | NDM-1 | IncX3 | 54 | C |
EC-15-2-35 | E. coli | ST540 | 2015.06.27 | 75yr/female | urine | urology | discharge | - | NDM-5 | IncX3 | 54 | D |
EC-15-2-56 | E. coli | ST167 | 2015.06.27 | 52yr/male | urine | urology | discharge | - | NDM-5 | IncX3 | 46 | A |
EC-15-2-24 | E. coli | ST540 | 2015.06.29 | 75yr/female | urine | urology | discharge | 2.5 × 10−5 | NDM-5 | IncX3 | 54 | D |
EC-15-2-47 | E. coli | ST540 | 2015.06.29 | 67yr/male | urine | urology | discharge | - | NDM-5 | IncX3 | 54 | D |
SM-15-2-16 | S. marcescens | NA | 2015.07.01 | 27yr/female | sputum | respiratory medicine | discharge | 2.5 × 10−5 | NDM-1 | IncX3 | 46 | B |
EC-15-2-132 | E. coli | ST410 | 2015.07.15 | 38ye/female | blood | Hematology dept | discharge | - | NDM-5 | IncX3 | 46 | D |
EC-15-2-51 | E. coli | ST617 | 2015.07.21 | 9mo/male | urine | ICU | discharge | - | NDM-5 | IncX3 | 46 | B |
EC-15-2-65 | E. coli | ST6388 | 2015.07.30 | 65yr/male | urine | ICU | discharge | 6.8 × 10−5 | NDM-5 | IncX3 | 46 | C |
KP-15-2-62 | K. pneumoniae | ST490 | 2015.07.30 | 2yr/female | blood | ICU | death | - | NDM-5 | IncX3 | 46 | D |
KP-15-2-52 | K. pneumoniae | ST1440 | 2015.08.03 | 66yr/male | urine | urology | death | 5.5 × 10−6 | NDM-5 | IncX3 | 46 | B |
CF-15-2-29 | C. freundii | ST22 | 2015.08.04 | 1mo/female | sputum | ICU | discharge | 8.8 × 10−4 | NDM-1 | IncX3 | 54 | C |
EC-15-2-26 | E. coli | ST167 | 2015.08.08 | 49yr/female | urine | gynecology | discharge | - | NDM-5 | IncX3 | 46 | B |
Pr-15-2-50 | P. rettgeri | NA | 2015.08.13 | 19yr/female | joint fluid | internal medicine | discharge | - | NDM-1 | - | - | - |
EC-15-2-1 | E. coli | ST167 | 2015.10.28 | 67yr/female | urine | cardiac surgery | discharge | - | NDM-5 | IncX3 | 54 | B |
EC-15-2-2 | E. coli | ST617 | 2015.10.28 | 56yr/male | drainage liquid | hepatological surgery | discharge | 3.3 × 10−5 | NDM-5 | IncX3 | 54 | D |
KP-15-2-6 | K. pneumoniae | ST11 | 2015.11.05 | 78yr/male | sputum | respiratory medicine | discharge | 1.1 × 10−5 | NDM-1 | IncX3 | 54 | C |
EC-15-2-152 | E. coli | ST405 | 2015.12.02 | 59yr/female | blood | ICU | death | - | NDM-5 | IncX3 | 46 | B |
EC-15-2-153 | E. coli | ST405 | 2015.12.04 | 61yr/male | drainage liquid | gastrointestinal surgery | discharge | - | NDM-1 | IncX3 | 46 | B |
EC-15-2-159 | E. coli | ST167 | 2015.12.08 | 23yr/male | urine | urology | discharge | - | NDM-5 | IncX3 | 46 | B |
CF-15-2-165 | C. portucalensis | NA | 2015.12.11 | 79yr/male | urine | urinary surgery | discharge | 3.3 × 10−4 | NDM-1 | IncX3 | 54 | E |
EC-16-7 | E. coli | ST167 | 2016.01.08 | 52yr/female | urine | kidney internal | discharge | 4.3 × 10−4 | NDM-1 | IncX3 | 54 | B |
ECL-16-5 | E. hormaechei | ST51 | 2016.01.08 | 82yr/male | sputum | ICU | death | 3.3 × 10−4 | NDM-1 | IncX3 | 54 | B |
EC-16-10 | E. coli | ST1193 | 2016.03.03 | 79yr/male | blood | ICU | death | - | NDM-5 | IncI1 | 93 | - |
CF-16-17 | C. freundii | ST18 | 2016.07.08 | 70yr/male | secreta | endocrinology | discharge | 1.8 × 10−5 | NDM-1 | IncX3 | 54 | E |
KO-16-21 | K. oxytoca | NA | 2016.07.10 | 83yr/male | sputum | ICU | discharge | 3.8 × 10−5 | NDM-1 | IncHI5 | 370 | - |
EC-16-20 | E. coli | ST617 | 2016.07.10 | 48yr/male | ascites | Infectious disease | discharge | - | NDM-5 | IncX3 | 46 | B |
EC-16-35 | E. coli | ST167 | 2016.07.16 | 10yr/female | ascites | pediatric surgery | discharge | 3.2 × 10−5 | NDM-5 | IncX3 | 46 | B |
EC-16-37 | E. coli | ST46 | 2016.07.18 | 51yr/female | urine | urology | discharge | 1.5 × 10−6 | NDM-5 | IncFII-IncFIA-IncFIB | 159 | - |
EC-16-52 | E. coli | ST410 | 2016.07.21 | 63yr/female | urine | pediatric surgery | discharge | - | NDM-5 | IncX3 | 46 | B |
KP-16-57 | K. pneumoniae | ST716 | 2016.07.26 | 10yr/male | sputum | ICU | discharge | 7.3 × 10−4 | NDM-1 | IncC | 180 | - |
CF-16-58 | C. braakii | NA | 2016.07.27 | 57yr/male | urine | respiratory medicine | discharge | 5.9 × 10−4 | NDM-1 | IncX3 | 54 | C |
EC-16-59 | E. coli | ST167 | 2016.07.29 | 45yr/male | tissue | kidney internal | discharge | - | NDM-5 | IncX3 | 46 | B |
EC-16-60 | E. coli | ST167 | 2016.07.29 | 2mo/female | sputum | ICU | discharge | 6.3 × 10−4 | NDM-5 | IncX3 | 54 | C |
CF-16-61 | C. freundii | ST22 | 2016.07.30 | 50yr/male | blood | ICU | discharge | 8.8 × 10−5 | NDM-1 | IncX3 | 54 | C |
ECL-16-74 | E. hormaechei | ST93 | 2016.08.03 | 45yr/male | drainage liquid | Liver transplantation | discharge | - | NDM-5 | IncX3 | 46 | C |
EC-16-76 | E. coli | ST2172 | 2016.08.06 | 58yr/male | urine | emergency internal medicine | discharge | - | NDM-5 | IncX3 | 54 | C |
ECL-16-79 | E. hormaechei | ST51 | 2016.10.20 | 54yr/female | bile | intervention department | discharge | 8.1 × 10−4 | NDM-5 | IncX3 | 46 | B |
MLST, multilocus sequence typing; NA, not available.
-, not detected.