Table 2. Association with diet and weight, and heritability of the epigenetic readouts.
Type | EAA | Diet | Mean (SD) | Diet (p) | rBW0* | pBW0 | rBWF* | pBWF | h2 | Strain r† |
---|---|---|---|---|---|---|---|---|---|---|
Mouse clocks | EAA, pan | CD | –0.05 ± 0.21 | <0.0001 | 0.19 | 0.006 | 0.29 | <0.0001 | 0.49 | 0.54 |
HFD | 0.07 ± 0.21 | 0.21 | 0.01 | 0.42 | <0.0001 | 0.50 | ||||
EAA, liver | CD | 0 ± 0.17 | ns | 0.09 | ns | 0.20 | 0.003 | 0.40 | 0.73 | |
HFD | 0.03 ± 0.14 | 0.22 | 0.01 | 0.49 | <0.0001 | 0.52 | ||||
dev.EAA, pan | CD | –0.04 ± 0.23 | 0.004 | 0.09 | ns | 0.22 | 0.001 | 0.53 | 0.76 | |
HFD | 0.03 ± 0.22 | 0.27 | 0.002 | 0.45 | <0.0001 | 0.61 | ||||
dev.EAA, liver | CD | 0 ± 0.2 | ns | 0.19 | 0.002 | 0.29 | <0.0001 | 0.46 | 0.78 | |
HFD | 0 ± 0.16 | 0.29 | 0.0007 | 0.47 | <0.0001 | 0.60 | ||||
int.EAA, pan | CD | –0.05 ± 0.25 | 0.0003 | 0.03 | ns | 0.21 | 0.002 | 0.27 | 0.66 | |
HFD | 0.06 ± 0.33 | 0.22 | 0.01 | 0.46 | <0.0001 | 0.45 | ||||
int.EAA, liver | CD | –0.04 ± 0.22 | <0.0001 | 0.05 | ns | 0.18 | 0.01 | 0.59 | 0.80 | |
HFD | 0.11 ± 0.25 | 0.27 | 0.002 | 0.58 | <0.0001 | 0.54 | ||||
Entropy | - | CD | 2.67 ± 0.02 | ns | 0.09 | ns | 0.05 | ns | 0.31 | 0.24(ns) |
HFD | 2.67 ± 0.02 | 0.15 | 0.09 | 0.15 | 0.09 | 0.32 |
CD, control diet; HFD, high-fat diet; EAA, epigenetic age acceleration; int, interventional; dev, developmental.
BW0 is body weight at about 4.5 months of age (n = 339; 210 CD and 129 HFD); BWF is final weight at tissue collection (1 HFD case missing data; n = 338; 210 CD and 128 HFD).
Pearson correlation between strain means for n = 29 BXD genotypes kept on CD and HFD.