Chemicals, Peptides, and Recombinant proteins
|
Sodium chloride (NaCl) |
Millipore Sigma |
Cat# S7653 |
Potassium chloride (KCl) |
Millipore Sigma |
Cat# P9333 |
Calcium chloride (CaCl2) |
Millipore Sigma |
Cat# 499609 |
Magnesium chloride (MgCl2) |
Millipore Sigma |
Cat# M8266 |
Lithium chloride (LiCl) |
Millipore Sigma |
Cat# 203637 |
Sodium acetate (NaAc) |
Millipore Sigma |
Cat# 241245 |
Sodium phosphate monobasic dihydrate (NaP) |
Millipore Sigma |
Cat# 71505 |
Choline chloride (ChCl) |
Millipore Sigma |
Cat# C7017 |
Sucrose |
Millipore Sigma |
Cat# S7903 |
D-Glucose |
Millipore Sigma |
Cat# NIST917C |
Coumarin (COU) |
Millipore Sigma |
Cat# C4261 |
EcoRI |
New England BioLabs |
Cat# R0101S |
XbaI |
New England BioLabs |
Cat# R0145S |
NdeI |
New England BioLabs |
Cat# R0111S |
SapI |
New England BioLabs |
Cat# R0569S |
Gibson assembly |
New England BioLabs |
Cat# E5510S |
Q5 |
New England BioLabs |
Cat# M0543S |
Q5 site-directed mutagenesis kit |
New England BioLabs |
Cat# E0554S |
RLT buffer |
Qiagen |
Cat # 79216 |
Apex Taq |
Genesee Science |
Cat #: 42-138 |
Episcript |
Lucigen |
ERT12925K |
Baseline-ZERO DNase |
Lucigen |
DB0715K |
Blocking Solution |
Roche |
Cat# 11921673001 |
SlowFade Gold antifade |
Thermo Fisher |
Cat# S36937 |
Antibodies
|
|
|
chicken anti-GFP |
Abcam |
Cat # ab13970 |
Rabbit anti-RFP |
TakaraBio |
Cat #632496 |
mouse anti-Bruchpilot |
DSHB |
Cat# nc82 |
donkey anti-mouse AF647 |
Invitrogen |
Cat #1900251 |
donkey anti-rabbit AF568 |
Invitrogen |
Cat # A-11011 |
goat anti-chicken AF488 |
Abcam |
Cat # ab150169 |
Experimental models: Organisms/strains
|
D. melanogaster: Ir56bMB09950
|
Bloomington Drosophila Stock Center |
Stock# 27818 |
D. melanogaster: wCS; Ir47a1
|
Figure 2
|
N/A |
D. melanogaster: wCS; Ir56b1
|
Figure 2
|
N/A |
D. melanogaster: wCS; UAS-Ir56b
|
Figures 2 and 3
|
N/A |
D. melanogaster: wCS; Ir56b-Gal4
|
Dr. John Carlson’s lab |
Koh et al., 2014
|
D. melanogaster: wCS; Ir25a2
|
Bloomington Drosophila Stock Center |
Stock# 41737 |
D. melanogaster: Ir76b1
|
Bloomington Drosophila Stock Center |
Stock# 51309 |
D. melanogaster: wCS; Gr89a-Gal4
|
Dr. John Carlson’s lab |
Weiss et al., 2011
|
D. melanogaster: Gr5a-Gal4
|
Bloomington Drosophila Stock Center |
Stock# 57592 |
D. melanogaster: w; Gr5a-LexA; UAS-mCD8GFP LexAop-mtdTomato
|
Dr. John Carlson’s lab |
Koh et al., 2014
|
D. melanogaster: wCS; Gr64f-Gal4
|
Dr. John Carlson’s lab |
Dahanukar et al., 2007
|
D. melanogaster: UAS-DTA
|
Bloomington Drosophila Stock Center |
Stock# 25039 |
D. melanogaster: wCS; Ir56bGal4
|
Figure 5
|
N/A |
D. melanogaster: UAS-DmelIr56b
|
Figure 6
|
N/A |
D. melanogaster: UAS-DereIr56b
|
Figure 6
|
N/A |
D. melanogaster: UAS-DvirIr56b
|
Figure 6
|
N/A |
D. melanogaster: UAS-DsimIr56b
|
Figure 6
|
N/A |
D. melanogaster: UAS-DsecIr56b
|
Figure 6
|
N/A |
D. melanogaster: UAS-DsuzIr56b
|
Figure 6
|
N/A |
D. melanogaster: UAS-DmelIr56bTCC
|
Figure 6
|
N/A |
D. melanogaster: UAS-DmelIr56bΔ51
|
Figure 6
|
N/A |
D. melanogaster: UAS-DmelIr56bΔ462
|
Figure 6
|
N/A |
Software and algorithms
|
AutoSpike 32 software |
Syntech |
http://www.ockenfels-syntech.com/
|
BLASTN |
NCBI |
https://blast.ncbi.nlm.nih.gov/
|
Clustal Omega |
EMBL-EBI |
https://www.ebi.ac.uk/Tools/msa/clustalo/
|
Mview |
EMBL-EBI |
https://www.ebi.ac.uk/seqdb/confluence/display/THD/Mview
|
SWISS-MODEL |
SIB Swiss Institute |
https://swissmodel.expasy.org/
|
NNSPLICE |
Berkeley Drosophila Genome Project |
https://www.fruitfly.org/seq_tools/splice.html
|
Oligonucleotides
|
See Table S3
|
This paper |
N/A |
Recombinant DNA |
|
|
pCFD5 |
Addgene |
Plasmid #73914 |
pHD-DsRed-attP |
Addgene |
Plasmid #51019 |
pUAST-attB-QS |
Addgene |
Plasmid #24366 |
Ir56b-gRNA-pCFD5 |
This paper |
N/A |
Ir56b-HomologyArms-pHD-DsRed-attP |
This paper |
N/A |
Ir56b-HomologyArms-Gal4-pHD-DsRed-attP |
This paper |
N/A |
DmelIr56b-gene-pUAST-attB-QS |
This paper |
N/A |
DsimIr56b-gene-pUAST-attB-QS |
This paper |
N/A |
DsecIr56b-gene-pUAST-attB-QS |
This paper |
N/A |
DereIr56b-gene-pUAST-attB-QS |
This paper |
N/A |
DsuzIr56b-gene-pUAST-attB-QS |
This paper |
N/A |
DvirIr56b-gene-pUAST-attB-QS |
This paper |
N/A |
DmelIr56b-gene-TTC-pUAST-attB-QS |
This paper |
N/A |
DmelIr56b-gene-Δ51-pUAST-attB-QS |
This paper |
N/A |
DmelIr56b-gene-Δ462-pUAST-attB-QS |
This paper |
N/A |
DmelIr56b-gene-pUAST-attB-QS |
This paper |
N/A |