Skip to main content
. 2022 Apr 28;12:6915. doi: 10.1038/s41598-022-10826-4

Table 6.

The protein properties of G. spinigerum matrix metalloproteinase-like protein and cathepsin B.

Properties Software Matrix metalloproteinase-like protein Cathepsin B
Molecular weight Expasy Compute pI/Mw tool 27,661.1 Da 52,709.06 Da
Isolectric point Expasy Compute pI/Mw tool 7.09 8.54
Signal peptide SignalP 5.1 Cleavage site between pos. 23 and 24 Cleavage site between pos. 31 and 32
Non-classical secretory SecretomeP-2.0 Server Containing signal peptide Containing signal peptide
Transmembrane protein TMHMM—2.0 Inside ( pos 1–6), Tmhelix (pos 7–26), outside (27–245) Outside (1–462)
N-glycosylation NetNGlyc—1.0 position 41, 59 Position 156, 243
O-glycosylation NetOGlyc—4.0 position 220, 226, 230, 234, 236 Position 175, 301, 303, 304, 315, 456
% similarity Clustal omega 28.74% with VDM58434.1 of Angiostrongylus spp. 62.21% with VDM57237.1 of Angiostrongylusspp.
30.29% with XP_024501568.1 of Strongyloides spp. 64.16% with XP_024507370.1 of Strongyloides spp.
30.40% with VZI42166.1 of Sparganum spp. 34.38% with VZI02086.1 of Sparganum spp.
31.9% with NP_002414.1 of H. sapiens 46.91% with NP_071447.1 of H. sapiens
Gene ontology UniProt Hydrolase, Protease and Metal-binding Cysteine-type peptidase activity
Molecular weight Expasy Compute pI/Mw tool 27,661.1 Da 52,709.06 Da
Isolectric point Expasy Compute pI/Mw tool 7.09 8.54
Signal peptide SignalP 5.1 Cleavage site between pos. 23 and 24 Cleavage site between pos. 31 and 32
Non-classical secretory SecretomeP-2.0 Server Containing signal peptide Containing signal peptide
Transmembrane protein TMHMM—2.0 Inside ( pos 1–6), Tmhelix (pos 7–26), outside (27–245) Outside (1–462)
N-glycosylation NetNGlyc—1.0 Position 41, 59 Position 156, 243
O-glycosylation NetOGlyc—4.0 Position 220, 226, 230, 234, 236 Position 175, 301, 303, 304, 315, 456