Table 1.
Total genes | EPD-matched genes | GC-box containing genes | GC-box gene % | Cumulative hypergeometric probability (p) | FDR-adjusted p valuea | |
---|---|---|---|---|---|---|
EPD all genes (hg38) | 16,455 | 16,455 | 7653 | 46.51 | ||
SCZ genes (SCHEMA) | ||||||
p value < 1E−4 | 32 | 28 | 19 | 67.86 | 0.0186* | 0.037* |
p value < 1E−3 | 61 | 47 | 31 | 65.96 | 0.0056** | 0.017* |
SCZ genes (GWAS) | ||||||
FINEMAP prioritized genes | 69 | 63 | 36 | 57.14 | 0.058 | 0.07 |
All prioritized genes | 643 | 357 | 184 | 51.54 | 0.0306* | 0.046* |
ASD genes | 102 | 88 | 42 | 47.73 | 0.4503 | 0.45 |
DD/ID genes | 299 | 258 | 141 | 54.65 | 0.005** | 0.017* |
aFDR at the level of 0.05; * < 0.05; ** < 0.01.