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. 2021 Nov 8;27(2):849–854. doi: 10.1038/s41380-021-01376-8

Table 1.

GC-boxes in proximal promoter regions of risk genes for SCZ, ASD, DD/ID.

Total genes EPD-matched genes GC-box containing genes GC-box gene % Cumulative hypergeometric probability (p) FDR-adjusted p valuea
EPD all genes (hg38) 16,455 16,455 7653 46.51
SCZ genes (SCHEMA)
  p value < 1E−4 32 28 19 67.86 0.0186* 0.037*
  p value < 1E−3 61 47 31 65.96 0.0056** 0.017*
SCZ genes (GWAS)
  FINEMAP prioritized genes 69 63 36 57.14 0.058 0.07
  All prioritized genes 643 357 184 51.54 0.0306* 0.046*
ASD genes 102 88 42 47.73 0.4503 0.45
DD/ID genes 299 258 141 54.65 0.005** 0.017*

aFDR at the level of 0.05; * < 0.05; ** < 0.01.