Table 1.
Glycopeptide–PG complex | Average number of H-bonds | MICa (µM) | ∆Gbindb (Kcal/mol) | ∆Gbindc (Kcal/mol) |
---|---|---|---|---|
Ori–PG | 5.50 ± 0.21 | < 0.016 | − 15.04 ± 0.66 | − 125.89 ± 18.06 |
Des-Ori–PG | 4.69 ± 0.16 | 0.30 | − 14.95 ± 0.99 | − 112.06 ± 20.98 |
CEremo–PG | 5.91 ± 0.07 | 0.29 | − 13.99 ± 0.64 | − 104.36 ± 16.35 |
Des-CEremo–PG | 4.89 ± 0.08 | 10.00 | − 12.56 ± 0.73 | − 91.96 ± 17.62 |
Vanco–PG | 5.52 ± 0.37 | 0.84 | − 11.07 ± 0.41 | − 88.06 ± 18.14 |
Des-Vanco–PG | 4.76 ± 0.07 | > 673 | − 8.45 ± 0.48 | − 75.77 ± 17.77 |
aExperimental minimal inhibitory concentration.
bBinding energy from umbrella sampling method.
cBinding energy from MM/PBSA method.