Atoms in molecules (AIM) analysis of consecutive DNAs and PNAs mediated with Hg2+ in canonical ATGC and TTTT mispair calculated at the B3LYP-D3/6-31G* level of theory in the aqueous phase.
DNA and PNA complexes with Hg2+ | Critical points | Density of all electrons | Laplacian of electron density (∇2r) | Total energy density H(r) | Potential energy density V(r) | Lagrangian kinetic energy G(r) | |V(r)|/G(r) |
---|---|---|---|---|---|---|---|
DATGCD | CP-193 | 0.04258 | 0.16492 | −0.00205 | −0.04098 | 0.03893 | 1.05 |
CP-233 | 0.06434 | 0.25514 | −0.00898 | −0.07227 | 0.06328 | 1.14 | |
CP-246 | 0.05602 | 0.21314 | −0.00601 | −0.05824 | 0.05223 | 1.11 | |
CP-248 | 0.05196 | 0.20745 | −0.00462 | −0.05469 | 0.05007 | 1.08 | |
CP-211 | 0.00568 | 0.02040 | 0.00093 | −0.00311 | 0.00404 | 0.77 | |
CP-220 | 0.00485 | 0.02067 | 0.00069 | −0.00378 | 0.00447 | 0.84 | |
CP-256 | 0.00436 | 0.01389 | 0.00044 | −0.00258 | 0.00302 | 0.85 | |
CP-167 | 0.01890 | 0.05901 | −0.00035 | −0.01546 | 0.01510 | 1.02 | |
CP-325 | 0.00392 | 0.01082 | 0.00046 | −0.00178 | 0.00224 | 1.25 | |
CP-318 | 0.03207 | 0.10872 | 0.00007 | −0.02703 | 0.02710 | 0.99 | |
CP-276 | 0.03122 | 0.10155 | −0.00030 | −0.02600 | 0.02569 | 1.01 | |
DTTTTD | CP-234 (Hg–Hg) | 0.01577 | 0.08644 | 0.00255 | −0.01485 | 0.01740 | 0.85 |
CP-208 (N–Hg) | 0.06731 | 0.25994 | −0.01017 | −0.07498 | 0.06481 | 1.15 | |
CP-239 (N–Hg) | 0.06604 | 0.25571 | 0.00962 | −0.07315 | 0.06352 | 1.10 | |
CP-253 (N–Hg) | 0.06718 | 0.26157 | −0.01011 | −0.07524 | 0.06513 | 1.15 | |
CP-237 (N–Hg) | 0.06599 | 0.25390 | −0.00963 | −0.07279 | 0.06316 | 1.15 | |
CP-195 | 0.00500 | 0.01933 | 0.00101 | −0.00271 | 0.00372 | 0.66 | |
CP-241 | 0.00454 | 0.01469 | 0.00045 | −0.00275 | 0.00321 | 0.66 | |
CP-190 | 0.00463 | 0.01766 | 0.00094 | −0.00252 | 0.00346 | 0.66 | |
CP-254 | 0.00377 | 0.01185 | 0.00044 | −0.00207 | 0.00251 | 1.00 | |
CP-201 | 0.00679 | 0.02151 | 0.00110 | −0.00317 | 0.00427 | 0.75 | |
DTTTTP | CP-175 (N–Hg) | 0.06813 | 0.26470 | −0.01050 | −0.07651 | 0.06600 | 1.15 |
CP-180 (N–Hg) | 0.06758 | 0.02622 | −0.01025 | −0.07554 | 0.06529 | 1.15 | |
CP-235 (N–Hg) | 0.29080 | −0.01087 | −0.30250 | −0.03332 | 0.03069 | 1.08 | |
CP-237 (N–Hg) | 0.06716 | 0.26124 | −0.01012 | −0.07519 | 0.06506 | 1.15 | |
CP-208 | 0.00473 | 0.01693 | 0.00081 | −0.00252 | 0.00334 | 0.75 | |
CP-205 | 0.00603 | 0.02115 | 0.00088 | −0.00339 | 0.00427 | 0.82 | |
CP-197 | 0.00453 | 0.01284 | 0.00045 | −0.00229 | 0.00275 | 0.84 | |
CP-162 | 0.00914 | 0.03121 | 0.00085 | −0.00609 | 0.00694 | 1.00 | |
CP-239 | 0.00575 | 0.01844 | 0.00071 | −0.00317 | 0.00389 | 0.81 | |
CP-256 | 0.02008 | 0.06815 | 0.00047 | −0.01608 | 0.01655 | 0.97 | |
PTTTTP | CP-180 (N–Hg) | 0.06599 | 0.25483 | −0.00967 | −0.07307 | 0.06340 | 1.15 |
CP-185 (N–Hg) | 0.06621 | 0.25651 | −0.00972 | −0.07351 | 0.06378 | 1.15 | |
CP-274 (N–Hg) | 0.06673 | 0.25862 | −0.00993 | −0.07431 | 0.06437 | 1.15 | |
CP-283 (N–Hg) | 0.06556 | 0.25368 | −0.00945 | −0.07243 | 0.06298 | 1.16 | |
CP-225 | 0.00616 | 0.02163 | 0.00089 | −0.00348 | 0.00438 | 0.79 | |
CP-230 | 0.00579 | 0.02036 | 0.00087 | −0.00323 | 0.00410 | 0.78 | |
CP-213 | 0.00297 | 0.00962 | 0.00046 | −0.00146 | 0.00193 | 0.75 | |
CP-246 | 0.00425 | 0.01219 | 0.00045 | −0.00214 | 0.00259 | 0.82 | |
CP-240 | 0.01010 | 0.03376 | 0.00076 | −0.00691 | 0.00767 | 0.90 |