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. Author manuscript; available in PMC: 2023 Apr 28.
Published in final edited form as: Cell. 2022 Apr 5;185(9):1506–1520.e17. doi: 10.1016/j.cell.2022.03.017

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
For WISH: Anti-Digoxigenin-AP Sigma-Aldrich Cat# 11093274910 RRID:AB_2734716
For FISH: Anti-Digoxigenin-horseradish peroxidase Roche Cat# 11207733910 RRID:AB_514500
For FISH: Anti-Fluorescein-horseradish peroxidase Sigma-Aldrich Cat# 11426346910
For FISH: Anti-DNP-horseradish peroxidase Vector Laboratories Cat# MB-0603-5
Bacterial and virus strains
MAX Efficiency DH10Bac Competent Cells for bacto-bac cloning Thermo Fisher Scientific Cat# 10361012
Biological samples
N/A
Chemicals, peptides, and recombinant proteins
ABC169 media supplement: bovine washed red blood cells Lampire Biological Products Cat# 7240808
ABC169 media supplement: porcine cholesterol concentrate Rocky Mountain Biologicals Cat# PCC-BDG-VCG
ABC169 media supplement: L-ascorbic acid Sigma-Aldrich Cat# A5960
tricaine Sigma-Aldrich Cat# A5040
Fast Blue BB Sigma-Aldrich Cat# F3378
EdU (5-ethynyl-2’-deoxyuridine) Invitrogen Cat# E10187
DAPI Sigma-Aldrich Cat# D9542
FAST SYBR Green Master Mix Bio-rad Cat# 1725122
cOmplete protease inhibitor Sigma-Aldrich Cat# 11873580001
Ni-NTA agarose Qiagen Cat# 4561
Strep-Tactin Sepharose resin Fisher Scientific Cat# NC9891255
[32P]PPi PerkinElmer Cat# NEX019001MC
[3H]βAlanine American Radiolabeled Chemicals Cat# ART 0205
[13C3]βAlanine Cambridge Isotope Laboratories Cat# clm-8755-PK
βAlanine Sigma-Aldrich Cat# 146064
mcBATT Synthesized by MuseChem, owned by this paper Batch# M21X01198
swBATT This paper Order# MCC-RC-106
Critical commercial assays
Direct-zol RNA MiniPrep Genesee Scientific Cat# 11-330
Illumina TruSeq stranded mRNA library kit Illumina Cat# 20020595
iScript cDNA Synthesis Kit Bio-Rad Cat# 1708891
Deposited data
gli1 RNAi RNAseq GEO GSE184849
BATT treatment female RNAseq GEO GSE191062
Single sex female RNAseq 1 WormBase ParaSite ERR1328130_1, ERR1328130_2
Single sex female RNAseq 2 WormBase ParaSite ERR1328191_1, ERR1328191_2
Single sex female RNAseq 3 WormBase ParaSite ERR1328215_1, ERR1328215_2
Mixed sex female RNAseq 1 WormBase ParaSite ERR1328194_1, ERR1328194_2
Mixed sex female RNAseq 2 WormBase ParaSite ERR1328218_1, ERR1328218_2
Mixed sex female RNAseq 3 WormBase ParaSite ERR1328156_1, ERR1328156_2
Experimental models: Cell lines
Sf9 ATCC CRL-1711
Experimental models: Organisms/strains
Parasites: Schistosoma mansoni NIAID Schistosomiasis Resource Center of the Biomedical Research Institute NMRI
Infected snails: Biomphalaria glabrata NIAID Schistosomiasis Resource Center of the Biomedical Research Institute NMRI
Infected female mice NIAID Schistosomiasis Resource Center of the Biomedical Research Institute Swiss-Webster
Oligonucleotides
Forward and reverse primers for riboprobe and dsRNA synthesis This paper, Table S5 N/A
Forward and reverse primers for qPCR detection This paper, Table S5 N/A
Recombinant DNA
pJC53.2-gli1 for RNAi and in situ hybridization This paper Plasmid# pJW186, Smp_266960
pJC53.2-Sm-nrps for RNAi and in situ hybridization This paper Plasmid# pRC90, Smp_158480
pJC53.2-7b2 for in situ hybridization This paper Plasmid# pLZ180, Smp_073270
pJC53.2-tppp2 for in situ hybridization This paper Plasmid# pLZ266, Smp_097490
pJC53.2-calp for in situ hybridization This paper Plasmid# pGW17, Smp_214190
pJC53.2-tpm2 for in situ hybridization This paper Plasmid# pLZ93, Smp_031770
pJC53.2-p48 for in situ hybridization This paper Plasmid# pLZ31, Smp_241610
pJC53.2-bmpg for in situ hybridization This paper Plasmid# pLZ262, Smp_078720
Protein expression construct: pFastBac1-His6-StrepII-TEV-SmNRPS, codon optimized to insect cells This paper Plasmid# pRC135_OP
Protein expression construct: pFastBac1-His6-StrepII-TEV-SmNRPS_S892A, codon optimized to insect cells This paper Plasmid# pRC135.S892A_OP
Protein expression construct: pFastBac1-His6-StrepII-TEV-Ebony This paper Plasmid# pRC136, protein NCBI: NM_079707.4
Software and algorithms
MassHunter Profinder software Agilent Technologies Version B.08.00 SP3
T-Coffee sequence alignment Snapgene 4.3.4 http://tcoffee.crg.cat/
MUSCLE sequence alignment Snapgene 4.3.4 https://www.ebi.ac.uk/Tools/msa/muscle/
STAR Dobin et al., 2013 [1] N/A
DESseq2 Love et al., 2014 [2] N/A
Other
40 μm cell strainer for female/male worm separation Thermo Fisher Scientific Cat# 22-363-547
speed vacuum Thermo Fisher Scientific Cat# SPD1010-115
6550 iFunnel Q-TOF mass spectrometer Agilent Technologies Cat# G6550BA
Acquity UPLC® HSS T3 column Waters Cat# 186003539
AB Sciex 6500+ QTRAP® mass spectrometer Framingham N/A
Nexera X2 UHPLC/HPLC Shimadzu and Columbia N/A
1.

Dobin, A., et al., STAR: ultrafast universal RNA-seq aligner. Bioinformatics, 2013. 29(1): p. 15–21.

2.

Love, M.I., W. Huber, and S. Anders, Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol, 2014. 15(12): p. 550.