Binding free energy (kcal mol−1) values obtained using molecular mechanics generalized Born surface area (MM/GBSA) method for both Conyza sumatrensis 5-enolpyruvyl shikimate-3-phosphate synthase (CsEPSPS) and Eleusine indica EPSPS (EiEPSPS) structures complexed with glyphosate and compared with the experimental half-maximal inhibitory concentration IC50.20,27 Electrostatic and van der Waals components (kcal mol−1) of the calculated binding free energies calculated for CsEPSPS and EiEPSPS structures complexed with glyphosate are shown in Table S1.
Structural variants | CsEPSPS | EiEPSPS | ||
---|---|---|---|---|
ΔGGBSA | IC50 (μM) | ΔGGBSA | IC50 (μM) | |
Sensitive | −95.80 ± 0.47 | 13.55 | −126.04 ± 0.47 | 20.0 |
Resistant | −75.64 ± 0.48 | 106.11 | −75.67 ± 0.56 | 52 938 |