| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Antibodies | ||
| GFP-Trap® agarose beads | ChromTek | Cat# gta-20; RRID:AB_2631357 |
| Rabbit polyclonal anti-giantin | Abcam | Cat# ab24586; RRID:AB_448163 |
| Mouse monoclonal anti-vinculin | Sigma-Aldrich | Cat# V9131; RRID:AB_477629 |
| Rabbit polyclonal anti-GFP | Abcam | Cat# ab6556; RRID:AB_305564 |
| Mouse monoclonal anti-tubulin | Life Technologies | Cat# 13-8000; RRID:AB_2533035 |
| Rabbit polyclonal anti-exoc6 | Sigma-Aldrich | Cat# HPA036285; RRID:AB_10673617 |
| Rabbit polyclonal anti-exoc6 | Abcam | Abcam Cat# ab104200; RRID:AB_10716450 |
| Mouse monoclonal anti-β1 integrin | Santa Cruz | Cat# sc-59829; RRID:AB_782090 |
| Rabbit polyclonal anti-sortilin | Abcam | Cat# ab16640; RRID:AB_2192606 |
| Monoclonal mouse anti-Rab33b | Abcam | Cat# ab57794; RRID:AB_945116 |
| Monoclonal mouse anti-histidine | AbD serotec | Cat# MCA1396; RRID:AB_322084 |
| Monoclonal mouse anti-GM130 | BD Transduction Laboratories | Cat# 610822; RRID:AB_398141 |
| Monoclonal mouse anti-Exo70 | Santa Cruz | Cat# sc-365825; RRID:AB_10843358 |
| Mouse monoclonal anti-Sec10 | Santa Cruz | Cat# sc-514802; RRID:AB_2891091 |
| Goat anti-Mouse IgG(H + L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 | Invitrogen | Cat# A-21121; RRID:AB_2535764 |
| Goat anti-Rabbit IgG(H + L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 | Invitrogen | Cat# A27034; RRID:AB_2610664 |
| Goat anti-Mouse IgG(H + L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 594 | Invitrogen | Cat# A-21155; RRID:AB_2535785 |
| Goat anti-Rabbit IgG(H + L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 594 | Invitrogen | Cat# A-11012; RRID:AB_2534079 |
| Goat anti-Mouse IgG(H + L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 647 | Invitrogen | Cat# A-21240; RRID:AB_2535809 |
| Goat anti-Rabbit IgG(H + L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 647 | Invitrogen | Cat# A-21244; RRID:AB_2535812 |
| Bacterial and virus strains | ||
| Escherichia coli BL21 (DE3) | Agilent Technologies | Cat# 200131 |
| Chemicals, peptides, and recombinant proteins | ||
| DAPI ((2-(4-Amidinophenyl)-6-indolecarbamidine) | Sigma-Aldrich | Cat# D9542 |
| Rhodamine-conjugated phalloidin | Invitrogen | Cat# R415 |
| Lipofectamin 2000 | Life Technologies | Cat# 10696153 |
| Lipofectamin RNAiMax | Life Technologies | Cat# 13778150 |
| His-dynabeads® | Thermo Fisher | Cat# 10103D |
| D-biotin | Sigma-Aldrich | Cat# B4501 |
| Fibronectin | Sigma | Cat# F2006 |
| Critical commercial assays | ||
| Yeast two-hybrid screen | Hybrigenics services | N/A |
| Experimental models: Cell lines | ||
| U-2 OS | ATCC | Cat# HTB-96; RRID:CVCL_0042 |
| hTERT RPE-1 | ATCC | Cat# CRL-4000; RRID:CVCL_4388 |
| Oligonucleotides | ||
| siRNA targeting sequence: Rab33b (siRNA_1) | Dharmacon | Cat# J-008909-07 |
| siRNA targeting sequence: Rab33b (siRNA_2) | Dharmacon | Cat# J-008909-08 |
| siRNA targeting sequence: Rab33b (siRNA_3) | Dharmacon | Cat# J-008909-06 |
| siRNA targeting sequence: Rab33b (siRNA_4) | Dharmacon | Cat# J-008909-09 |
| Control siRNA: ACU UCG AGC GUG CAU GGC UTT | MWG-Biotech | N/A |
| siRNAs used in the RNAi primary screen, see Table S1 | Dharmacon | N/A |
| Recombinant DNA | ||
| pEGFP-C1 vector | BD Bioscience Clontech | Cat# 6084-1 |
| pEGFP-C1 Rab33b wt | GenScript | N/A |
| pEGFP-C1 Rab33b Q92L | GenScript | N/A |
| pEGFP-C1 Rab33b T47N | GenScript | N/A |
| pcDNA3.1-N-myc Rab33b wt | GenScript | N/A |
| pET-16b Rab33b wt | GenScript | N/A |
| pET-16b Rab33b Q92L | GenScript | N/A |
| pET-16b Rab33b T47N | GenScript | N/A |
| pET-16b Rab9 wt | Progida et al., 2012 | N/A |
| pET-16b Rab9 Q66L | This paper | N/A |
| pCAG-mCherry-C-Sec15A | Kazuhisa Nakayama. Katoh et al., 2015 |
N/A |
| RFP-vinculin | Harald Stenmark. Lobert and Stenmark, 2012 | N/A |
| Vinculin-GFP | Xian Hu | N/A |
| mApple-Integrin-β1 | Addgene (from Michael Davidson) | Addgene plasmid # 54914; RRID:Addgene_54914 |
| YFP-VSV-G | Susanne Pfeffer. Espinosa et al., 2009 |
N/A |
| BFP-Rab33b | This paper | N/A |
| Ii-STR-TNF-SBP-EGFP | Addgene (from Franck Perez). Boncompain et al., 2012 | Addgene plasmid # 65280; RRID:Addgene_65280 |
| Software and algorithms | ||
| ImageJ | https://imagej.nih.gov/ij/ | N/A |
| GraphPad Prism 9 | GraphPad Software Inc., https://www.graphpad.com | N/A |
| IncuCyte Zoom software analysis | Essen bioscience | N/A |