TABLE 2.
The significantly upregulated genes related to nitrogen metabolism#.
| Protein name | Gene ID | FPKM |
FC | Log2FC | Function | |
| High salt | Low salt | |||||
| NA | TVD_RS03400 | 134.21 | 3.615 | 42.323 | 5.403 | Nitrate regulatory protein |
| NrtA | TVD_RS03405 | 30650.935 | 251.76 | 136.09 | 7.088 | Nitrate uptake |
| TVD_RS08095 | 907.85 | 32.615 | 31.302 | 4.968 | ||
| TVD_RS08110 | 8216.5 | 1522.26 | 6.031 | 2.592 | ||
| NrtB | TVD_RS03410 | 15043.425 | 306.04 | 55.296 | 5.789 | |
| TVD_RS08100 | 567.245 | 17.045 | 38.056 | 5.250 | ||
| TVD_RS08115 | 7561.32 | 1158.695 | 7.383 | 2.884 | ||
| NrtC | TVD_RS03415 | 32590.38 | 1054.955 | 34.907 | 5.125 | |
| TVD_RS08090 | 809.25 | 10.55 | 86.569 | 6.436 | ||
| TVD_RS08120 | 7568.27 | 1412.43 | 6.069 | 2.602 | ||
| NasA | TVD_RS03430 | 4498.09 | 179.755 | 27.957 | 4.805 | NO3– → NO2– |
| NirB | TVD_RS03420 | 9293 | 391.055 | 26.506 | 4.728 | NO2– + NADH + H+ → NH3 + NAD+ + H2O |
| NirD | TVD_RS03425 | 3084.07 | 147.525 | 24.842 | 4.635 | |
| GlnA | TVD_RS13790 | 11191.13 | 1517.44 | 8.316 | 3.056 | L-Glutamate + NH3 + ATP → L-Glutamine + ADP + Pi |
| GlnK | TVD_RS01365 | 7960.275 | 607.495 | 15.556 | 3.959 | P-II family nitrogen regulator |
| GlnG | TVD_RS12985 | 452.58 | 57.905 | 8.743 | 3.128 | Nitrogen regulation protein NR(I) |
| GlnL | TVD_RS12990 | 120.695 | 18.755 | 7.318 | 2.871 | PAS domain-containing sensor histidine kinase |
| Amt | TVD_RS01370 | 22694.515 | 3576.315 | 7.144 | 2.837 | Ammonium transporter |
| NifA | TVD_RS08105 | 57.84 | 0.825 | 79.789 | 6.318 | Sigma-54-dependent Fis family transcriptional regulator |
| CynS | TVD_RS08125 | 15042.885 | 3917.965 | 4.493 | 2.168 | Cyanate + HCO3– + H+ → NH3 + CO2 |
#NA, Not annotated.