TABLE 3.

Filtered matches for effector sequences in Xhv and related Xanthomonas strains.

Bolded effectors are those predicted for all X. hortorum strains. Those effectors with an asterisk indicate that they are TALEs. Solid color indicates a match of >60% identity, >40% qcovhsp, and >0.00001 e-value; striped color lowers the percent identity filter to >45%; and no fill corresponds to absence of that effector gene. Blue color corresponds to Xhv race 1 hits, red to Xhv race 2 hits, green to Xhv race 3 hits, and gray to related Xanthomonas reference strain hits. Thick box borders indicate gene presence verified through targeted gene amplification and visualization by gel electrophoresis.