. 2022 May 3;13:2424. doi: 10.1038/s41467-022-30057-5

Table 3.

E. coli 16S rRNA methylations identified in the Q-TOF dataset.

Mod	Position	Target sequence	S_p (l)^a	ΔS_pD^b (l)^a	S_p (h)^a	ΔS_pD^b (h)^a	Min FDR^c
[m⁷G]	527	525-CC[m⁷G]CG-529	0.299	0.55	0.231	0.29	3%
[m⁵C]	967	967-[m⁵C]AACG-971	0.711	0.86	0.752	0.86	<1%
[m⁴Cm]	1402	1402-[m⁴Cm]CCG-1405	0.833	0.82	1.009	0.83	<1%
[m⁵C]	1407	1406-U[m⁵C]ACACCAUG-1415	0.445	0.91	0.888	0.74	<1%
[m³U]	1498	1498-[m³U]AACAAG-1504	0.993	0.67	1.188	0.94	<1%
[m₂⁶A]	1518	1518-[m₂⁶A][m₂⁶A]CCUG-1523	1.445	0.75	1.429	0.74	<1%
[m₂⁶A]	1519	1518-[m₂⁶A][m₂⁶A]CCUG-1523	1.445	0.75	1.429	0.74	<1%

^aData shown for light- (l) or heavy- (h) labeled RNA species identified.

^bΔS_pD is defined as ΔS_p score of the highest-scoring competing decoy.

^cLowest FDR threshold at which the modification is detected.