Table 7.
DNA methylation levels of fragments related to genes involved in growth, steroidogenesis or reproduction
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% Methylation |
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Methylation difference (%) |
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| ID | Len | CpGs | Description | DMF | Ctl | 4 ng/L | 120 ng/L | 4 – Ctl | 120 – Ctl | 120–4 | P-value | Test | |
| XP_017294595.1 | 85 | 9 | Oestrogen receptor beta-like | Gene body | 94.71 | 96.28 | 95.30 | 1.57 | 0.59 | −0.98 | 0.07493 | F(2.12) = 3.24 | |
| XP_017267390.1 | 54 | 8 | Oestrogen receptor beta-like | Promoter | 97.06 | 97.82 | 96.54 | 0.76 | −0.52 | −1.28 | 0.13056 | F(2.12) = 2.42 | |
| XP_017267390.1 | 72 | 6 | Oestrogen receptor beta-like | Gene body | 94.50 | 95.72 | 95.28 | 1.22 | 0.78 | −0.44 | 0.14477 | F(2.12) = 2.28 | |
| XP_017267390.1 | 101 | 6 | Oestrogen receptor beta-like | Gene body | 29.99 | 33.30 | 29.14 | 3.31 | −0.85 | −4.16 | 0.39458 | F(2.12) = 1.01 | |
| XP_017260454.1 | 104 | 4 | Oestrogen-related receptor gamma-like | Gene body | 85.19 | 89.50 | 86.40 | 4.31 | 1.21 | −3.10 | 0.0425 | F(2.12) = 4.16 | |
| XP_017291458.1 | 96 | 4 | Oestrogen-related receptor gamma-like | Gene body | 81.14 | 85.59 | 81.55 | 4.45 | 0.41 | −4.04 | 0.0446 | F(2.11) = 4.18 | |
| XP_017262455.1 | 153 | 5 | Vitellogenin-1-like | Gene body | 91.30 | 89.95 | 81.87 | −1.35 | −9.43 | −8.08 | 0.0050 | F(2.10) = 9.45 | |
| XP_017262455.1 | 89 | 6 | Vitellogenin-1-like | Gene body | 90.45 | 93.45 | 89.99 | 3.00 | −0.46 | −3.46 | 0.0105 | F(2.12) = 6.82 | |
| XP_017262455.1 | 75 | 6 | Vitellogenin-1-like | Gene body | 92.58 | 92.50 | 92.81 | −0.08 | 0.23 | 0.31 | 0.6645 | F(2.12) = 0.42 | |
| XP_017295559.1 | 72 | 6 | Aromatase | Gene body | 87.84 | 87.62 | 84.35 | −0.22 | −3.49 | −3.27 | 0.0093 | F(2.12) = 7.08 | |
| XP_017295559.1 | 137 | 12 | Aromatase | Gene body | 92.69 | 93.60 | 94.71 | 0.91 | 2.02 | 1.11 | 0.1607 | F(2.12) = 2.14 | |
| XP_017267185.1 | 131 | 5 | Insulin-like growth factor I | Gene body | 4.51 | 3.68 | 2.51 | −0.83 | −2.00 | −1.17 | 0.2681 | F(2.11) = 1.49 | |
| XP_017267185.1 | 150 | 9 | insulin-like growth factor I | Promoter | 91.94 | 93.76 | 94.54 | 1.82 | 2.60 | 0.78 | 0.3066 | F(2.12) = 1.31 | |
| XP_017259346.1 | 44 | 3 | Insulin-like growth factor II | Gene body | 95.35 | 96.63 | 93.88 | 1.28 | −1.47 | −2.75 | 0.1261 | F(2.12) = 2.47 | |
| XP_017274518.1 | 64 | 4 | Insulin-like growth factor II | Gene body | 5.53 | 4.72 | 5.07 | −0.81 | −0.46 | 0.35 | 0.7446 | F(2.12) = 0.30 | |
| XP_017274518.1 | 44 | 3 | Insulin-like growth factor II | Gene body | 4.86 | 5.91 | 4.55 | 1.05 | −0.31 | −1.36 | 0.1565 | F(2.12) = 2.17 | |
| XP_017284163.1 | 86 | 7 | Insulin-like growth factor 1 receptor | Gene body | 92.18 | 94.49 | 91.72 | 2.31 | −0.46 | −2.77 | 0.0390 | F(2.12) = 4.30 | |
| XP_017284163.1 | 153 | 13 | Insulin-like growth factor 1 receptor | Gene body | 94.08 | 94.82 | 91.76 | 0.74 | −2.32 | −3.06 | 0.0701 | F(2.12) = 3.34 | |
| XP_017261561.1 | 164 | 13 | Insulin-like growth factor 1 receptor | Gene body | 91.60 | 95.83 | 92.94 | 4.23 | 1.34 | −2.89 | 0.0823 | F(2.10) = 3.24 | |
| XP_017284163.1 | 138 | 10 | Insulin-like growth factor 1 receptor | Gene body | 88.79 | 92.11 | 90.51 | 3.32 | 1.72 | −1.60 | 0.1541 | F(2.12) = 2.19 | |
| XP_017279935.1 | 55 | 7 | Insulin-like growth factor 2 mRNA-binding protein 2 | Gene body | 95.81 | 97.37 | 95.80 | 1.56 | −0.01 | −1.57 | 0.0029 | F(2.12) = 9.85 | |
| XP_017279935.1 | 98 | 10 | insulin-like growth factor 2 mRNA-binding protein 2 | Gene body | 90.32 | 93.25 | 88.80 | 2.93 | −1.52 | −4.45 | 0.0129 | F(2.12) = 6.40 | |
| XP_017279586.1 | 97 | 6 | Insulin-like growth factor 2 mRNA-binding protein 3 | Gene body | 91.79 | 93.45 | 90.36 | 1.66 | −1.43 | −3.09 | 0.0669 | F(2.12) = 3.42 | |
| XP_017292570.1 | 75 | 10 | Insulin-like growth factor-binding protein 1 | Promoter | 1.26 | 1.66 | 1.19 | 0.40 | −0.07 | −0.47 | 0.1667 | F(2.12) = 2.09 | |