Figure 4.

The diversification patterns of the recently duplicated genes in CS.

(A) Different patterns of GO enrichment for recently duplicated genes in the three subgenomes of CS.

(B) Distribution of expression levels for differentially retained genes among the three subgenomes of CS. “ABD” indicates that the three subgenomes all retained duplicates; “AB” indicates that only the A and B subgenomes retained duplicates; and “A” indicates that only the A subgenome retained duplicates.

(C) Differentially retained duplicates assigned to particular modules (same, divergent, or none) in a co-expression network analysis. w/o same module indicates divergent co-expression networks; w/same module indicates the same network; w/o module indicates that neither gene was assigned to a network.