TABLE 9.
The drug–receptor residue interactions between compounds with 6LU7
| Compound | Drug residue | Receptor residue | Type of H for drugs | Type of H for receptor | Interaction | Distance (Å) |
|---|---|---|---|---|---|---|
| (1) | NH2 complex | ASN142:OD1 | H‐Don. | H‐Acc. | H. bond | 1.91 |
| H15 aldehyde | GLU166:O | H‐Don. | H‐Acc. | H. bond | 2.12 | |
| H16 aldehyde | GLU166:O | H‐Don. | H‐Acc. | H. bond | 2.06 | |
| C pyridine | ASN142:OD1 | H‐Don. | H‐Acc. | C–H. bond | 3.24 | |
| Br | ASP187:C | Halogen | H‐Acc. | Halogen | 3.53 | |
| Ph ring | MET165 | Alkyl | Alkyl | Alkyl Hyd. | 5.24 | |
| Py ring | HIS163 | Alkyl | Pi‐orbital | π‐Alkyl Hyd. | 5.29 | |
| (2) | O aldehyde | GLU166:HN | H‐Acc. | H‐Don. | H. bond | 2.69 |
| NH2 complex | ASN142:OD1 | H‐Don. | H‐Acc. | H. bond | 2.51 | |
| NH2 complex | ASN142:OD1 | H‐Don. | H‐Acc. | H. bond | 2.22 | |
| H19 aldehyde | GLU166:O | H‐Don. | H‐Acc. | H. bond | 2.20 | |
| H19 aldehyde | O aldehyde | H‐Don. | H‐Acc. | H. bond | 2.13 | |
| H18 aldehyde | N BTZ | H‐Don. | H‐Acc. | H. bond | 2.10 | |
| S BTZ | PHE140:O | Sulfur | O, N, S | Sulfur‐X | 3.17 | |
| S BTZ | HIS163 | Sulfur | π‐Orbital | π‐Sulfur | 4.88 | |
| S BTZ | HIS 172 | Sulfur | π‐Orbital | π‐Sulfur | 5.73 | |
| Ph ring | MET 165 | Alkyl | Alkyl | Alkyl Hyd. | 4.93 | |
| Br | HIS41 | Alkyl | π‐Orbital | π‐Alkyl Hyd. | 4.51 | |
| Ph ring | HIS41 | Alkyl | π‐Orbital | π‐Alkyl Hyd. | 5.38 | |
| (SB) | O ligand | LYS100:HZ2 | H‐Acc. | H‐Don. | H. bond | 1.77 |
| O ligand | CYS156:SG | H‐Acc. | H‐Don. | H. bond | 3.73 | |
| H ligand | ASP33:OD2 | H‐Don. | H‐Acc. | H. bond | 2.00 | |
| H ligand | ASP33:OD1 | H‐Don. | H‐Acc. | H. bond | 1.69 | |
| H ligand | N ligand | H‐Don. | H‐Acc. | H. bond | 1.77 | |
| Ring of ligand | TYR101:O | π‐Orbital | Lone pair | π‐Lone pair | 2.99 | |
| Br | LYS102 | Alkyl | Alkyl | Alkyl Hyd. | 4.24 | |
| Ring of ligand | LYS102 | π‐Orbital | Alkyl | π‐Alkyl Hyd. | 4.75 | |
| (BTZ) | N ligand | VAL18:CA | H‐Acc. | H‐Don. | C–H. bond | 3.78 |
| Ring of ligand | GLY71:HN | H‐Acc. | H‐Don. | π‐Don‐H. bond | 2.37 | |
| Ring of ligand | MET17:O | π‐Orbital | Lone pair | π‐Lone pair | 2.87 | |
| C ligand | ALA70 | Alkyl | Alkyl | Alkyl Hyd. | 3.49 | |
| C ligand | VAL18 | Alkyl | Alkyl | Alkyl Hyd. | 5.40 | |
| C ligand | TRP31 | Alkyl | π‐Orbital | π‐Alkyl Hyd. | 4.77 | |
| Ring of ligand | A:ALA70 | π‐Orbital | Alkyl | π‐Alkyl Hyd. | 4.71 | |
| Favipiravir | O ligand | HIS41:HD1 | H‐Acc. | H‐Don. | H. bond | 2.93 |
| O ligand | TYR54:HH | H‐Acc. | H‐Don. | H. bond | 1.97 | |
| H | HIS164:O | H‐Don. | H‐Acc. | H. bond | 1.98 | |
| H | MET49:O | H‐Don. | H‐Acc. | H. bond | 2.14 | |
| F | GLN189:OE1 | Halogen | Halogen Acc. | Halogen | 3.07 | |
| Ph ring | HIS41:NE2 | Pi‐orbital | Positive | Electrostatic (pi‐cation) | 4.18 | |
| Ph ring | MET49:SD | Pi‐orbital | Sulfur | Π‐Sulfur | 4.59 | |
| Ph ring | HIS41 | Pi‐orbital | Pi‐orbital | Hyd. (π–π stacked) | 3.95 |