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. 2019 Oct 30;9(60):35089–35097. doi: 10.1039/c9ra04637b

RMSF statistics for 300 K trajectories (Å)a.

Pt-Aβ16 Pt-Aβ42
Mean 3.61 7.49
SD 1.03 1.77
Min 2.32 4.41
Max 6.06 12.66
a

Cα–Cα distances in Pt-Aβ16 and Pt-Aβ42 are used to interrogate the tertiary structure of the peptides, as represented in the contact maps in Fig. 2. In the shorter peptide, the longest inter-residue distances occur for Asp1, with values in excess of 20 Å for residues Val12 through Lys16. Indeed there is little structure in the contact map: close contact between Pt-binding residues 6 and 14 is apparent, while the sequence between these is also restricted to relatively short distances. The longer peptide exhibits more structure: Asp1 again has the longest distances, most notably to amino acids in the CHC and the extreme C-terminus. Longer distances are also found for the sequences Ser8-Tyr10 with Asp23-Lys28. Short contact is found for His6 with His14 and the residues between them, and also between Phe19-Ala21 with Gly29-Gly33.