Table 2.

Genetic diversity indices. Mean expected heterozygosity (He), total number of alleles detected (A), allelic richness (Ar) rarefied to 362 diploid individuals per population, mean inbreeding coefficient (F_IS), and the probability of deviation from Hardy–Weinberg equilibrium (P_HWE) for each microsatellite locus per site. n, number of miracidia genotyped per site.

Locus	Adzopé (n = 440)					Agboville (n = 465)					Duekoué (n = 527)					Sikensi (n = 534)					Total (n = 1966)
	He	A	Ar	F IS	P HWE	He	A	Ar	F IS	P HWE	He	A	Ar	F IS	P HWE	He	A	Ar	F IS	P HWE	He	A	Ar
Sh9	0.72	9	8.86	0.37	<0.001	0.58	11	10.49	0.41	<0.001	0.78	12	11.67	0.50	<0.001	0.54	10	8.68	0.33	<0.001	0.66	14	10.98
Sh3	0.83	14	13.96	0.20	<0.001	0.78	15	14.60	0.11	<0.001	0.88	16	15.53	0.08	<0.001	0.83	14	13.47	0.01	0.836	0.83	16	15.00
C102	0.44	4	3.84	0.10	0.220	0.46	6	5.76	−0.06	<0.001	0.43	7	6.70	0.08	0.819	0.50	5	4.66	−0.06	<0.001	0.46	7	6.05
Sh1	0.77	9	8.88	0.01	<0.001	0.68	9	8.55	−0.01	<0.001	0.75	12	11.97	0.03	<0.001	0.74	8	7.99	−0.03	<0.001	0.74	13	11.85
Sh14	0.81	14	14.00	0.04	<0.001	0.83	14	13.84	0.03	<0.001	0.83	15	14.63	0.00	<0.05	0.82	16	15.56	−0.01	<0.001	0.82	17	15.78
Sh6	0.53	7	6.98	0.24	<0.001	0.58	7	6.99	0.07	<0.001	0.48	7	7.00	−0.01	<0.001	0.60	7	6.99	−0.11	<0.001	0.55	7	7.00
C111	0.55	4	4.00	0.18	<0.001	0.44	5	5.00	0.11	<0.001	0.65	8	7.59	0.03	0.276	0.56	8	7.44	0.01	0.688	0.55	9	7.12
Sh7	0.68	7	6.83	0.26	<0.001	0.74	5	5.00	0.32	<0.001	0.64	7	6.99	0.31	<0.001	0.64	5	4.74	0.32	<0.001	0.68	7	6.69
Sh13	0.66	15	14.67	0.01	<0.001	0.51	14	13.37	0.01	<0.001	0.69	15	14.52	−0.02	<0.001	0.71	14	13.64	−0.03	0.408	0.64	17	15.68
Sh4	0.74	9	9.00	0.05	<0.01	0.73	9	8.92	0.08	<0.001	0.80	11	10.82	0.04	<0.001	0.85	9	9.00	0.07	<0.001	0.78	11	10.22
Sh11	0.51	7	6.62	−0.01	<0.001	0.68	6	5.81	0.12	<0.001	0.46	8	7.54	0.13	<0.001	0.70	8	7.66	0.09	<0.001	0.59	10	7.80
Sh15	0.49	7	7.00	0.16	<0.001	0.54	6	6.00	0.17	<0.001	0.50	6	5.97	0.13	<0.001	0.46	6	6.00	−0.02	<0.001	0.50	7	7.00
Sh2	0.78	13	13.00	0.35	<0.001	0.80	12	12.00	0.32	<0.001	0.89	14	13.96	0.45	<0.001	0.86	12	12.00	0.35	<0.001	0.83	15	14.64
Sh5	0.73	10	9.90	0.44	<0.001	0.47	13	12.34	0.26	<0.001	0.80	15	14.70	0.10	<0.001	0.64	9	8.73	0.16	<0.001	0.66	16	13.95
Sh10	0.48	8	7.85	0.51	<0.001	0.53	6	5.79	0.35	<0.001	0.48	8	7.88	0.31	<0.001	0.33	7	6.64	0.10	<0.001	0.46	8	7.56
Sh12	0.10	4	3.83	−0.04	0.972	0.29	6	5.95	0.03	<0.001	0.07	7	6.06	−0.03	1.0	0.23	8	7.58	−0.06	<0.001	0.17	10	7.68
Mean	0.61	8.81	8.70	0.18	−	0.60	9.00	8.78	0.15	−	0.63	10.50	10.22	0.13	−	0.63	9.13	8.80	0.07	−	0.62	11.50	10.31
SE	0.19	3.60	3.61	0.17	−	0.15	3.61	3.47	0.14	−	0.22	3.61	3.59	0.17	−	0.18	3.28	3.22	0.15	−	0.18	3.88	3.65

SE: Standard error.