REAGENT or RESOURCE	SOURCE	IDENTIFIER
Antibodies
2-36	Liu et al. (2020) Wang et al. (2021)	N/A
2-15	Liu et al. (2020)	N/A
2-7	Liu et al. (2020)	N/A
1-57	Liu et al. (2020)	N/A
1-20	Liu et al. (2020)	N/A
4-18	Liu et al. (2020)	N/A
5-24	Liu et al. (2020)	N/A
4-19	Liu et al. (2020)	N/A
5-7	Liu et al. (2020)	N/A
REGN10987	Hansen et al. (2020)	N/A
REGN10933	Hansen et al. (2020)	N/A
LY-CoV555	Jones et al. (2021)	N/A
CB6	Shi et al. (2020)	N/A
CT-P59	Kim et al. (2021)	N/A
S309	Pinto et al. (2020)	N/A
COV2-2130	Zost et al. (2020)	N/A
COV2-2196	Zost et al. (2020)	N/A
Brii-196	Ju et al. (2020)	N/A
LY-CoV1404	Westendorf et al. (2022)	N/A
ADG-2	Rappazzo et al. (2021)	N/A
Bacterial and virus strains
VSV-G pseudo-typed ΔG-luciferase	Kerafast	Cat# EH1020-PM
Biological samples
Convalescent human plasma samples	Huashan Hospital, Fudan University	N/A
Serum samples from BBIBP-CorV Vaccine	Huashan Hospital, Fudan University	N/A
Serum samples from ZF2001 Vaccine	Huashan Hospital, Fudan University	N/A
Critical commercial assays
Luciferase Assay System	Beyotime	Cat# RG066M
Experimental models: Cell lines
Vero E6	ATCC	Cat# CRL-1586
Expi293F	ThermoFisher	Cat# A14527
I1 mouse hybridoma	ATCC	Cat# CRL-2700
Recombinant DNA
pCMV3-SARS-CoV-2-spike D614G	Wang et al. (2021)	N/A
FC4122-SARS-CoV-2-spike BA.1	Wang et al. (2022)	N/A
FC4122-SARS-CoV-2-spike BA.1.1	This study	N/A
pCMV3-SARS-CoV-2-spike BA.2	This study	N/A
pCMV3-SARS-CoV-2-spike BA.3	This study	N/A
pCMV3-SARS-CoV-2-spike T19I	This study	N/A
pCMV3-SARS-CoV-2-spike del24-26	This study	N/A
pCMV3-SARS-CoV-2-spike A27S	This study	N/A
pCMV3-SARS-CoV-2-spike del24-26+A27S	This study	N/A
pCMV3-SARS-CoV-2-spike A67V+del69-70	This study	N/A
pCMV3-SARS-CoV-2-spike T95I	This study	N/A
pCMV3-SARS-CoV-2-spike G142D	This study	N/A
pCMV3-SARS-CoV-2-spike del143-145	This study	N/A
pCMV3-SARS-CoV-2-spike G142D+del143-145	This study	N/A
pCMV3-SARS-CoV-2-spike del211+L212I+ins214EPE	This study	N/A
pCMV3-SARS-CoV-2-spike V213G	This study	N/A
pCMV3-SARS-CoV-2-spike G339D	This study	N/A
pCMV3-SARS-CoV-2-spike R346K	This study	N/A
pCMV3-SARS-CoV-2-spike S371L	This study	N/A
pCMV3-SARS-CoV-2-spike S371F	This study	N/A
pCMV3-SARS-CoV-2-spike S373P	This study	N/A
pCMV3-SARS-CoV-2-spike S375F	This study	N/A
pCMV3-SARS-CoV-2-spike S371L+S373P+S375F	This study	N/A
pCMV3-SARS-CoV-2-spike T376A	This study	N/A
pCMV3-SARS-CoV-2-spike D405N	This study	N/A
pCMV3-SARS-CoV-2-spike R408S	This study	N/A
pCMV3-SARS-CoV-2-spike K417N	This study	N/A
pCMV3-SARS-CoV-2-spike N440K	This study	N/A
pCMV3-SARS-CoV-2-spike G446S	This study	N/A
pCMV3-SARS-CoV-2-spike S477N+T478K	This study	N/A
pCMV3-SARS-CoV-2-spike E484A	This study	N/A
pCMV3-SARS-CoV-2-spike Q493R	This study	N/A
pCMV3-SARS-CoV-2-spike G496S	This study	N/A
pCMV3-SARS-CoV-2-spike Q498R	This study	N/A
pCMV3-SARS-CoV-2-spike Q493R+G496S+Q498R	This study	N/A
pCMV3-SARS-CoV-2-spike N501Y	This study	N/A
pCMV3-SARS-CoV-2-spike Y505H	This study	N/A
pCMV3-SARS-CoV-2-spike T547K	This study	N/A
pCMV3-SARS-CoV-2-spike H655Y	This study	N/A
pCMV3-SARS-CoV-2-spike N679K+P681H	This study	N/A
pCMV3-SARS-CoV-2-spike N764K	This study	N/A
pCMV3-SARS-CoV-2-spike D796Y	This study	N/A
pCMV3-SARS-CoV-2-spike N856K	This study	N/A
pCMV3-SARS-CoV-2-spike Q954H	This study	N/A
pCMV3-SARS-CoV-2-spike N969K	This study	N/A
pCMV3-SARS-CoV-2-spike L981F	This study	N/A
Software and algorithms
GraphPad Prism Software	GraphPad Prism Software, Inc.	N/A
MEGA 11	Tamura et al. (2021)	https://www.megasoftware.net/
CLUSTAL W	Thompson et al. (1994)	N/A
Ggtree	Yu et al. (2017)	https://bioconductor.org/packages/release/bioc/html/ggtree.html