Table II.
Gene variants | Primer sequences (5′→3′) | TM (°C) | Amplicon (bp) | Exon |
---|---|---|---|---|
MLH1 c.350C>T | F: GTGACCCAGCAGTGAGTTTT | 58 | 245 | 4 |
R: AGCCTCACTTTTACCCTCTCT | ||||
MSH6 c.3311_3312del | F: AGCCTCACTTTTACCCTCTCT | 58 | 398 | 5 |
R: TGGCTGACTTTTATGTAACTGTG | ||||
MSH6 c.892C>T | F: TGGTGGCTCTGATGTGGAAT | 59 | 206 | 4 |
R: TTGCTTGTTTGGTGGCTGAG | ||||
ATM c.3802delG | F: TGCTACTGAACAAGGTCCCA | 59 | 448 | 26 |
R: CTCTCTTTGCTGTGCCATCC | ||||
MLH1 c.376T>A | F: GTGACCCAGCAGTGAGTTTT | 58 | 245 | 4 |
R: ACGTACTCAAGATCTCTGCCA | ||||
EPCAM c.332A>G | F: TGATGAAGGCAGAAATGAATGG | 58 | 250 | 3 |
R: ACAAGTAGTATAGGCAGCCCC | ||||
MSH3 c.1778G>A | F: CCTGGGCATTAGAGTGGGAA | 58 | 264 | 13 |
R: TGTCCTCAAGCTGAAGAACAC | ||||
MLH3 c.470T>C | F: TATGGTTTCCGAGGAGAGGC | 59 | 232 | 2 |
R: CCAGTCTAGGGTCCATGCAT | ||||
MLH3 c.3440A>T | F: TCAGTTTGTGCAGAAAGAGGT | 58 | 250 | 3 |
R: GAGTTAGGTGGTACGATGTGT | ||||
ATM c.7475T>G | F: AGGAAGGTGTGTGAATTGCA | 58 | 465 | 50 |
R: CCTGACATCAAGGGGCTTATG | ||||
ATM c.1178G>T | F: GGCAACAACAGCGAAACTCT | 58 | 396 | 9 |
R: TGTCATGGCAATCACATATCCC | ||||
ATM c.8734A>G | F: ATTAGCTGTCAAACCTCCTAACT | 58 | 221 | 60 |
R: TGCCCAGCCCATGTAATTTT | ||||
CHEK2 c.911T>C | F: TGTCTTCTGTCCAAGTGCGT | 59 | 245 | 9 |
R: GGTCCCTCGATTTCTGCCTA | ||||
PMS2 c.1004A>G | F: AAAGTGAATTTGGCTGGGCG | 59 | 498 | 10 |
R: TGGCTGCTGACTGACATTTAGCTTG | ||||
PMS2 c.2249G>A | F: TCTCAGGAAGTTTTGTGACACT | 59 | 295 | 13 |
R: CACCCAGCCGCTATAGTTCT | ||||
PMS2 c.1253C>T | F: GACCCTCTTCTCCGTCCAC | 58 | 491 | 11 |
R: GAGAGTCCACATGTTCCTGC | ||||
MLH1 c.589-9_589-6delGTTT | F: GTTTGCTGGTGGAGATAAGGT | 58 | 392 | 8 |
R: ACGCCACAGAATCTAGGAGA | ||||
MRE11 c.1783+7A>G | F: ACTTTCTCCTTCTTCTCCCTCT | 59 | 410 | 15 |
R: TGTCAGAACTGCCTTAAAGACTG | ||||
CDH1 c.585A>C | F: TTCTCTGGGAGGGATTTGGC | 59 | 293 | 5 |
R: CCCGGTGTCAACAAGCTTC | ||||
CDH1 c.344C>T | F: GAAGATTGCACCGGTCGAC | 58 | 250 | 3 |
R: CAACAGCGAACTTCTCAGAAAA | ||||
NF1 c.4445T>C | F: CTGGGTGTATCTGGTGTTGAAAA | 58 | 486 | 34 |
R: GGATCTATAACAATCTGCAAGCC | ||||
CHEK2 c.688G>T | F: CTTGAAGTGGACCCAGGAGT | 58 | 242 | 6 |
R: TGGGAAGTTATGAAGACGTGTT |
F, forward; R, reverse.