TABLE 2.
Gene composition of the chloroplast genome of Polygonum.
| Category | Group of genes | Name of genes |
|---|---|---|
| Self-replication | Large subunit of ribosomal proteins | rpl2 a , b , 14, 16 a , 20, 22 b , 32, 33, 36 |
| Small subunit of ribosomal proteins | rps2, 3, 4, 7 b , 8, 11, 12 a , b , 14,15, 16 a , 18, 19 b | |
| DNA-dependent RNA polymerase | rpoA, B, C1 a , C2 | |
| rRNA genes | rrn16S b , rrn23S b , rrn4.5S b , rrn5S b | |
| tRNA genes | trnA-UGC a , b , trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-UCC, trnG-GCC, trnH-GUG, trnI-CAU, trnI-GAU a , b , trnK-UUU a , trnL-CAA, trnL-UAA, trnL-UAG, trnM-CAU, trnN-GUU, trnP-UGG, trnQ-UUG, trnR-ACG, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC, trnV-UAC a , trnW-CCA, trnY-GUA | |
| Photosynthesis | Photosystem I | psaA, B, C, I, J |
| Photosystem II | psbA, B, C, D, E, F, H, I, J, K, L, M, N, T, Z, | |
| NADH oxidoreductase | ndhA a , B a , b , C, D, E, F, G, H, I, J, K | |
| Cytochrome b6/f complex | petA, B a , D a , G, L, N | |
| ATP synthase | atpA, B, E, F a , H, I | |
| Rubisco | rbcL | |
| Other genes | Maturase | matK |
| Protease | clpP a | |
| Envelope membrane protein | cemA | |
| Subunit acetyl-CoA-carboxylase | accD | |
| c-type cytochrome synthesis gene | ccsA | |
| Conserved open reading frames | ycf1 b , 2 b , 3 a , 4 |
a
Genes containing introns.
b
Duplicated gene (genes present in the IR regions).