TABLE 3.
Characteristic | Beta | Hazard ratio (95% CI for HR) | p Value | |
---|---|---|---|---|
Sex | −0.17 | 0.84 (0.6–1.2) | 3.10E-01 | |
IC level | −0.34 | 0.71 (0.59–0.85) | 2.10E-04 | *** |
TC level | −0.03 | 0.98 (0.8–1.2) | 8.10E-01 | |
TMB | −0.05 | 0.96 (0.93–0.98) | 3.10E-04 | *** |
TNB | −0.36 | 0.7 (0.59–0.83) | 6.10E-05 | *** |
Lund2 | 0.19 | 1.2 (1.1–1.4) | 1.70E-03 | ** |
TCGA subtype | 0.00 | 1 (0.88–1.1) | 9.60E-01 | |
HR score group | −0.56 | 0.57 (0.42–0.77) | 2.60E-04 | *** |
Immune checkpoint | −0.08 | 0.93 (0.87–0.99) | 1.50E-02 | * |
CD 8 T effector | −0.10 | 0.91 (0.86–0.96) | 3.30E-04 | *** |
DDR | −0.04 | 0.96 (0.94–0.99) | 4.80E-03 | ** |
APM | −0.07 | 0.93 (0.87–1) | 4.50E-02 | * |
CC Reg | 0.10 | 1.1 (1–1.2) | 1.80E-02 | * |
Fanconi | −0.07 | 0.94 (0.9–0.97) | 7.80E-04 | *** |
Gene19 | 0.03 | 1 (0.98–1.1) | 2.40E-01 | |
Tcga | 0.01 | 1 (0.94–1.1) | 8.30E-01 | |
Histones | −0.08 | 0.92 (0.85–1) | 5.00E-02 | |
EMT1 | 0.02 | 1 (0.95–1.1) | 6.30E-01 | |
EMT2 | 0.03 | 1 (0.96–1.1) | 4.00E-01 | |
EMT3 | 0.01 | 1 (0.94–1.1) | 7.40E-01 | |
WNT target | 0.17 | 1.2 (1–1.4) | 8.30E-03 | ** |
FGFR3 related | 0.05 | 1.1 (0.95–1.2) | 2.90E-01 | |
Cell cycle | −0.03 | 0.97 (0.95–0.99) | 1.30E-02 | * |
Mismatch repair | −0.06 | 0.95 (0.9–0.99) | 2.70E-02 | * |
Homologous recombination | −0.08 | 0.93 (0.88–0.98) | 3.40E-03 | ** |
Nucleotide excision repair | −0.05 | 0.95 (0.91–1) | 3.20E-02 | * |
DNA replication | −0.04 | 0.96 (0.92–0.99) | 1.50E-02 | * |
Base excision repair | −0.05 | 0.95 (0.9–1) | 4.20E-02 | * |
Risk score | 0.82 | 2.3 (1.8–2.9) | 5.70E-11 | *** |
***p < 0.001; **p < 0.01; *p < 0.05.
TMB, tumor mutation burden; TNB, tumor neoantigen burden; IC, immune cells; TC, tumor cells; HR, homologous recombination; DDR, DNA, damage repair; APM: antigen processing and presentation machinery; CC, reg, cell cycle regulation.