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. 2022 Apr 15;7(16):13704–13720. doi: 10.1021/acsomega.1c07361

Table 2. Experimental and Calculated Geometric Parameters for the Heterocyclic Derivatives Calculated at the M06-2X/6-311++G(d,p) and the MP2/aug-cc-pVTZ Level of Theory.

atoms azepane (X-ray) M06-2X/6-311++G(d,p) MP2/aug-ccPVTZ oxepane (X-ray) M06-2X/6-311++G(d,p) MP2/aug-ccPVTZ thiepane (X-ray) M06-2X/6-311++G(d,p) MP2/aug-ccPVTZ
C1–C2 1.527 1.5335 1.5297 1.546 1.5283 1.5239 1.5391 1.5341 1.5303
C1–C4 1.527 1.5328 1.5289 1.510 1.5331 1.5285 1.5418 1.5368 1.5332
C2–C3 1.528 1.5297 1.5255 1.511 1.5389 1.5285 1.5348 1.5288 1.5253
C3–C5 1.526 1.5343 1.5294 1.511 1.5348 1.5312 1.5336 1.5293 1.5261
C4–C6 1.528 1.5395 1.5351 1.434 1.529 1.5248 1.532 1.5277 1.5241
C5–X 1.456 1.459 1.4602 1.434 1.4159 1.4225 1.8423 1.8226 1.8157
C6–X 1.459 1.4587 1.4593 1.363 1.4102 1.4164 1.852 1.8291 1.8204
N19–H20 1.02 1.0124 1.0122            
RMSD   0.007 0.004   0.044 0.043   0.012 0.017
Bond Angle (Ǻ)
C2–C1–C4 111.167 112.9414 112.6682 109.158 113.6749 113.4912   113.695 113.2515
C3–C5–C–N19 112.168 114.4365 114.1215 114.519 115.6218 115.463   116.2287 115.7837
C4–C6–N19 109.062 117.1339 117.089 111.080 112.5323 112.4612   114.0879 113.5635
C–C–H 109.556 109.7392 109.3667 109.510 109.5672 109.5859   109.5322 109.3938
RMSD   4.286 4.199   2.436 2.323      
Dihedral Angles
C1C4C6N19 –41.612 –39.3082 –39.8087 –73.612 52.1585 –72.2138   –72.3498 –72.2894
C2–C1–C4–H16 –74.232 –153.0755 –152.5683 –177.707 –157.5784 –156.3957   –142.2856 –141.4007
C1C4C6H12 168.626 –162.7305 –163.133 164.936 –163.8118 –163.7655   –46.7798 –45.7234