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. 2022 May 10;11:e76664. doi: 10.7554/eLife.76664

Key resources table.

Reagent type (species) or resource Designation Source or reference Identifiers Additional information
Cell line (Mus musculus) wt L1210 ATCC Cat#CCL-219
Cell line (Mus musculus) FUCCI L1210 Other Generated in a previous study (Son et al., 2015, Nature Methods), cells originate from ATCC (Cat#CCL-219)
Cell line (Mus musculus) BaF3 RIKEN BioResource Center Cat#RCB4476
Cell line (Homo sapiens) S-HeLa Other Kindly provided by laboratory of Kevin Elias from Brigham And Women’s Hospital
Cell line (Homo sapiens) THP-1 Other Kindly provided by laboratory of Jianzhu Chen from Massachusetts Institute of Technology
Cell line (Mus musculus) wt L1210 ATCC Cat#CCL-219
Chemical compound, drug STLC Sigma-Aldrich Cat#164739; CAS:2799-07-7
Chemical compound, drug Barasertib Cayman Chemical Cat#13600; CAS:639089-54-6 Alternative Names: MK 0457, VX 680
Chemical compound, drug EIPA Cayman Chemical Cat#14406; CAS:1154-25-2
Chemical compound, drug RO-3306 Cayman Chemical Cat#15149; CAS:872573-93-8 All experiments were done using a stock under 2 weeks of age
Chemical compound, drug Vacuolin-1 Cayman Chemical Cat#20425; CAS:351986-85-1
Chemical compound, drug Brefeldin A Cayman Chemical Cat#11861; CAS:20350-15-6
Antibody Anti-LAMP-1 conjugated to Alexa Fluor 488 (rat monoclonal) Thermo Fisher Scientific Cat#53-1071-82; RRID:AB_657536 Clone: eBio1D4B (1D4B) (1:50 dilution)
Antibody IgG2a kappa Isotype Control conjugated to Alexa Fluor 488 (rat monoclonal) Thermo Fisher Scientific Cat#53-4321-80; RRID:AB_493963 Clone: eBR2a (1:50 dilution)
Antibody Anti-LAMP-1 conjugated to Alexa Fluor 488 (mouse monoclonal) Thermo Fisher Scientific Cat#53-1079-42; RRID:AB_2016657 Clone: eBioH4A3 (1:50 dilution)
Other RPMI media, powder Thermo Fisher Scientific Cat#31800022 Cell culture media
Other Heavy water (D2O) Sigma-Aldrich Cat#151882; CAS:7789-20-0 Heavy water used for culture media
Other NUCLEAR-ID Red DNA stain Enzo Life Sciences Cat#ENZ-52406 DNA stain (1:250 dilution)
Other 10 μm Diameter Duke Standards 2000 Series Uniform Polystyrene Particles Thermo Fisher Scientific Cat#2010A Standard particles for calibration
Software, algorithm MATLAB R2017b and R2021b MathWorks Used to analyze the SMR raw data and generate data plots
Software, algorithm Origin 2021b OriginLab Used to perform statistical analyses and generate data plots