Table 3.
Genome characterization of Phasi Charoen-like phasivirus genome described in this study.
| Segment | Strain name | Segment (accession_no) | Segment length (bp) | ORF length (aa) | Encoded gene | Closest strain in GenBank | Identity (%) |
|---|---|---|---|---|---|---|---|
| L | B1S_100b_PCLP | OM522847 | 6781 | 2217 | RNA-dependent RNA polymerase | MT361069.1 | 97.50 |
| B2S_48_PCLP | OM522851 | 6156 | 279 | RNA-dependent RNA polymerase | MN053766 | 98.44 | |
| B2S_73_PCLP | OM522854 | 6471 | 351 | RNA-dependent RNA polymerase | MT361069.1 | 97.62 | |
| B2S_83_PCLP | OM522855 | 5906 | 316 | RNA-dependent RNA polymerase | MT361069.1 | 95.93 | |
| B1S_59_PCLP | OM522848 | 6731 | 2217 | RNA-dependent RNA polymerase | MH237599.1 | 98.60 | |
| B1S_88_PCLP | OM522849 | 6738 | 2217 | RNA-dependent RNA polymerase | MT361069.1 | 97.58 | |
| B1S_100c_PCLP | OM522856 | 6514 | 837 | RNA-dependent RNA polymerase | MT361069.1 | 92.00 | |
| M | B1S_100b_PCLP | OM522860 | 3819 | 1237 | Glycoprotein | MH237598.1 | 97.07 |
| B2S_48_PCLP | OM522870 | 3564 | 501 | Glycoprotein | MN053776.1 | 97.41 | |
| B2S_50_PCLP | OM522869 | 3346 | 192 | Glycoprotein | MN053776.1 | 96.84 | |
| B2S_73_PCLP | OM522871 | 3521 | 1492 | Glycoprotein | MN053776.1 | 97.13 | |
| B2S_83_PCLP | OM522868 | 3600 | 620 | Glycoprotein | MN053782.1 | 95.72 | |
| B1S_59_PCLP | OM522861 | 3768 | 1237 | Glycoprotein | MH237598.1 | 96.97 | |
| B1S_88_PCLP | OM522862 | 3833 | 1237 | Glycoprotein | MH237598.1 | 94.04 | |
| B1S_100c_PCLP | OM522867 | 3593 | 558 | Glycoprotein | MH237598.1 | 97.84 | |
| NB3_58_PCLP | OM522866 | 3354 | 217 | Glycoprotein | MN053776.1 | 98.20 | |
| NB3_120_PCLP | OM522863 | 3768 | 1237 | Glycoprotein | MH237598.1 | 97.21 | |
| NB3_126_PCLP | OM522872 | 3614 | 552 | Glycoprotein | MN053776.1 | 96.77 | |
| NB3_150_PCLP | OM522865 | 3620 | 350 | Glycoprotein | MN053776.1 | 97.57 | |
| S | B1S_100b_PCLP | OM522873 | 1331 | 268 | Nucleocapsid | MN866293.1 | 96.31 |
| B2S_73_PCLP | OM522876 | 769 | 250 | Nucleocapsid | MN866293.1 | 95.84 | |
| B2S_83_PCLP | OM522882 | 728 | 109 | Nucleocapsid | MN866293.1 | 97.67 | |
| B1S_59_PCLP | OM522877 | 1326 | 268 | Nucleocapsid | MN866293.1 | 96.98 | |
| B1S_88_PCLP | OM522878 | 1331 | 268 | Nucleocapsid | MN866293.1 | 96.53 | |
| B1S_100c_PCLP | OM522879 | 861 | 265 | Nucleocapsid | MN866293.1 | 96.28 | |
| NB3_58_PCLP | OM522884 | 1290 | 199 | Nucleocapsid | MT361067.1 | 95.06 | |
| NB3_120_PCLP | OM522880 | 1325 | 268 | Nucleocapsid | MN866293.1 | 96.00 | |
| NB3_126_PCLP | OM522881 | 665 | 189 | Nucleocapsid | MT361067.1 | 98.05 | |
| NB3_150_PCLP | OM522883 | 1024 | 117 | Nucleocapsid | MN866293.1 | 96.62 |