Table 2.
Overview of currently active databases related to neurological data.
| Database | Web address | Data type | Reference(s) |
|---|---|---|---|
| PDGene | http://www.pdgene.org/ | Meta-analysis of genome-wide association studies (GWAS) | [304] |
| MDSGene | http://www.mdsgene.org/ | Genetic mutations, movement disorder genes related to PD | [305] |
| Alzforum | https://www.alzforum.org/mutations | Repository of variants in genes linked to AD | [306] |
| AlzGene | http://www.alzgene.org/ | Systematic meta-analyses of AD | [307] |
| Neuroinformatics Database (NiDB) | https://www.nitrc.org/projects/nidb/ | Imaging | [308] |
| Neuroscience Information Framework (NIF) | https://neuinfo.org/ | Metadata (imaging, genes, omics, function, grants, protocols etc.) | [309] |
| BrainMaps | http://brainmaps.org/ | Brain structure and function | [310] |
| Hippocampome Portal | http://www.hippocampome.org/php/index.php | Morphology, molecular marker, membrane biophysics and synaptic physiology | [311] |
| NeuroElectro | https://neuroelectro.org/ | Electrophysiological properties | [312] |
| NeuroMorpho | http://neuromorpho.org/index.jsp | Neuromorphology and metadata | [313] |
| NeuronDB | https://senselab.med.yale.edu/NeuronDB/ | Voltage gated conductances, neurotransmitter receptors, and neurotransmitter substances | [313] |
| Collaborative Research in Computational Neuroscience (CRCNS) |
http://crcns.org/ | Electrophysiology and behavioral data | [314] |
| NeuroImaging Tools and Resources Collaboratory (NITRC) | https://www.nitrc.org/ | Neuroimaging, imaging genomics software tools, data, and computational resources | [315] |
| BigBrain | https://bigbrainproject.org/ | Ultrahigh-Resolution 3D Human Brain Model | [316] |
| Brain Transcriptome database (BrainTx) | http://www.cdtdb.brain.riken.jp | Gene expression | [317] |
| Marmoset Gene Atlas | https://gene-atlas.brainminds.riken.jp/ | Gene expression | [318] |
| Allen Brain Map | https://portal.brain-map.org/ | Metadata (gene expression, imaging toolkits etc.) |
[319] |
| BrainCloud | https://www.libd.org/brain-cloud/ | Gene expression | [320] |
| M2IA | http://m2ia.met-bioinformatics.cn/ | Microbiome and metabolome integrative analysis | [283] |
| Microbiota-Active Substance Interaction Database (MASI) |
http://www.aiddlab.com/MASI/ | Effect of bioactive compounds on microbiota and vice versa | [284] |