Table 1.
Summary statistics and genetic diversity estimates calculated from partial eastern moa mitochondrial genomes. Sample size (n), haplotype frequency (H), haplotype diversity (HD), nucleotide diversity (π), frequency of segregating sites (S), average number of nucleotide substitutions (k), Tajima's D-statistic (TD), Fu's F-statistic (FF). Bold values indicate statistical significance.
| subset | n | H | HD | Π (SD) | S | k | TD (p-value) | FF (p-value) |
|---|---|---|---|---|---|---|---|---|
| all samples | 46 | 22 | 0.862 | 0.00013 (0.00002) | 28 | 1.882 | −2.358 (0.0006) | −20.225 (<0.0000) |
| Late Pleistocene (>11.6 Kya) | 12 | 4 | 0.636 | 0.00005 (0.00001) | 3 | 0.742 | −0.828 (0.2376) | −1.255 (0.08060) |
| Holocene (<11.6 Kya) | 23 | 16 | 0.945 | 0.00015 (0.00002) | 18 | 2.182 | −2.012 (0.0082) | −13.492 (<0.0000) |
| within putative LGM refugium (southern South Island) | 19 | 13 | 0.906 | 0.00016 (0.00003) | 19 | 2.363 | −2.165 (0.0010) | −8.883 (<0.0000) |
| outside putative LGM refugium | 27 | 9 | 0.761 | 0.00009 (<0.0000) | 9 | 1.242 | −1.49 (0.0444) | −4.552 (0.00180) |