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. Author manuscript; available in PMC: 2022 May 11.
Published in final edited form as: Cell Rep. 2022 Apr 12;39(2):110652. doi: 10.1016/j.celrep.2022.110652

KEY RESOURCE TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rabbit anti-HaloTag pAb Promega Cat# G9281; RRID:AB_713650
Anti-mNeonGreen nAb Allele Biothechnology Cat# ABP-NAB-MNGAB; RRID: AB_2629489
Chemicals
JF585 Laboratory of Luke D. Lavis Grimm et al. (2017),Grimm et al. (2015),Grimm et al. (2016)
JF646 Laboratory of Luke D. Lavis Grimm et al. (2017),Grimm et al. (2015),Grimm et al. (2016)
DMSO Sigma D2650-5X5ML
Genetic fragments
GFP nano body add gene 89,367
6HNL PDB 6HNL
6O2D PDB 6O2D
8KY8 PDB 8KY8
3HON PDB 3HON
3XF6 PDB 3XF6
6GWK PDB 6GWK
3ZQM PDB 3ZQM
5LFJ PDB 5LFJ
3H5L Huang et al. (2014) 3H5L_2_mini
HOTag3 Thomson et al. (2014) HOTag3
H protein Sun et al. (2014) H protein
Yrb-1 Parsons et al. (2002) Yrb-1
AraD Luo et al. (2001) AraD
Experimental models: Organisms/strains
C. elegans wild-type strain Caenorhabditis Genetics Center N2
C.elegans transgenic strain expressing GFP::UTRO
Genotype: xsSi3 [GFP::utrophin + Cbr-unc-119(+)]
Tse et al. (2012) MG589
C. elegans trains with endogenously tagged NMY-2::mKate2
Genotype: nmy-2(cp69[nmy-2::mkate2 + LoxP]) I
Dickinson et al., (2017) LP256
C.elegans strain with endogenously tagged mNG::PAR-3
Genotype: par-3(cp54[mNeonGreen::3xFlag::par-3]) III
Dickinson et al. (2017) LP242
C.elegans strain with endogenously tagged mSc::PAR-3 and transgenenic GFP::UTRO
Genotype: par-3(djd18[EYFP-C1dPi::par-3]) III; xsSi3 [GFP::utrophin + Cbr-unc-119(+)] II
this study UTX136
C.elegans strain withendogenously tagged NMY-2::mKate and mNG::PAR-3
Genotype: nmy-2(cp52[nmy-2::mkate2 + LoxP unc-119(+) LoxP]) I; par-3(cp54[mNeonGreen::3xFlag::par-3]) III
this study LP636
C.elegans strain withendogenously tagged Halo::PAR-3 par-3(cp323[HaloTag-GLO PAR-3]) III Dickinson et al. (2017) LP621
C.elegans transgenic strain expressing GFPnAb::HaloTag
Genotypes: djdIs19 [Psun-1::GFPnb::HALO::3xFlag + SEC] II
this study UTX44
C.elegans transgenic strain expressing nAb::HaloTag::6mer(HOTag3)
Genotype:djdIs7 [Psun-1::GFPnb::HALO::3xFlag::HexamerD + SEC] II
this study UTX17
C.elegans transgenic strain expressing nAb::HaloTag::3mer(3H5L_2_mini)
Genotype: djdIs11 [Piffb-1::GFPnb::HALO::3xFlag::TrimerD + SEC] II
this study UTX21
C.elegans transgenic strain expressing nAb::HaloTag::10mer(H protein)
Genotype: djdIs15 [Piffb-1::GFPnb::HALO::3xFlag::DecamerD + SEC] II
this study UTX25
C.elegans strain with endogenously tagged YFP::PAR-3
Genotype: par-3(djd18[EYFP-C1dPi::par-3]) III
this study UTX52
C. elegans strain with RRKEEE mutations and an N-terminal YFP in endogenous par-3
Genotype: par-3(djd5 [EYFP-C1dPi::PAR-3(RRKEEE)]) III
this study UTX30
C.elegans transgenic strain expressing mNG::6HNL
Genotype: djdIs22 [Pmex5::mNG::3XFLAG::6HNLdimer] II
this study UTX66
C.elegans transgenic strain expressing mNG::3HON
Genotype: djdIs24 [Pmex5::mNG::3XFLAG::3HON3mer] II
this study UTX68
C.elegans transgenic strain expressing mNG::2XF6
Genotype: djdIs25 [Pmex5::mNG::3XFLAG::2XF6hexamer] II
this study UTX69
C.elegans transgenic strain expressing mNG::6GWK
Genotype: djdIs27 [Pmex5::mNG::3XFLAG::GWKhexamer] II
this study UTX71
C.elegans transgenic strain expressing mNG::3ZQM
Genotype: djdIs30 [Pmex5::mNG::3XFLAG::3ZQM10mer] II
this study UTX74
C.elegans transgenic strain expressing mNG::5LFJ
Genotype: djdIs32 [Pmex5::mNG::3XFLAG::5LFJ12mer] II
this study UTX76
C. elegans strain with RRKEEE mutations and an N-terminal YFP in endogenous par-3 and trasgenic nAb::HaloTag::6mer(HOTag3)
Genotype: djdIs7 [Psun-1::GFPnb::HALO::3xFlag::HexamerD + SEC] II; par-3(djd6) [EYFP-C1dPi::PAR-3(RRKEEE)] III
this study UTX47
C. elegans strain with RRKEEE mutations and an N-terminal YFP in endogenous par-3 and trasgenic nAb::Halo
Genotype: djdIs21 [Psun-1::GFPnb::HALO::3xFlag + SEC] II; par-3(djd6 [EYFP-C1dPi::PAR-3(RRKEEE)]) III
this study UTX50
C.elegans transgenic strain expressing nAb::BFP::2mer(6HNL)
Genotype: djdIs34 [Psun-1::GFPnb::mTagBFP2::6HNLdimer + SEC] II
this study UTX86
C.elegans transgenic strain expressing nAb::BFP::3mer(3HON)
Genotype: djdIs35 [Psun-1::GFPnb::mTagBFP2::3HONtrimer + SEC] II
this study UTX88
C.elegans transgenic strain expressing nAb::BFP::4mer(AraD)
Genotype:djdIs38 [Psun-1::GFPnb::mTagBFP2::AraD tetramer + SEC] II
this study UTX92
C.elegans transgenic strain expressing nAb::BFP::4mer(Yrb1)
Genotype: djdIs39 [Psun-1::GFPnb::mTagBFP2::Yrb1 tetramer + SEC] II
this study UTX94
C.elegans transgenic strain expressing nAb::BFP::6mer(6GWK)
Genotype: djdIs36 [Psun-1::GFPnb::mTagBFP2::2XF6hexamer + SEC] II
this study UTX89
C. elegans strain with RRKEEE mutations and an N-terminal YFP in endogenous par-3 and trasgenic nAb::BFP::2mer(6HNL)
Genotype: djdIs34 [Psun-1::GFPnb::mTagBFP2::6HNLdimer + SEC] II; par-3(djd6 [EYFP-C1dPi::PAR-3(RRKEEE)]) III
this study UTX105
C. elegans strain with RRKEEE mutations and an N-terminal YFP in endogenous par-3 and trasgenic nAb::BFP::3mer(3HON)
Genotype: djdIs34 [Psun-1::GFPnb::mTagBFP2::3HONtrimer + SEC] II; par-3(djd6 [EYFP-C1dPi::PAR-3(RRKEEE)]) III
this study UTX80
C. elegans strain with RRKEEE mutations and an N-terminal YFP in endogenous par-3 and trasgenic nAb::BFP::4mer(AraD)
Genotype: djdIs38 [Psun-1::GFPnb::mTagBFP2::AraD tetramer + SEC] II; par-3(djd6 [EYFP-C1dPi::PAR-3(RRKEEE)]) III
this study UTX104
C. elegans strain with RRKEEE mutations and an N-terminal YFP in endogenous par-3 and trasgenic nAb::BFP::4mer(Yrb-1) djdIs34 [Psun-1::GFPnb::mTagBFP2::Yrb1 tetramer + SEC] II; par-3(djd6 [EYFP-C1dPi::PAR-3(RRKEEE)]) III this study UTX81
C. elegans strain with RRKEEE mutations and an N-terminal YFP in endogenous par-3 and trasgenic nAb::BFP::6mer(6GWK)
Genotype: djdIs36 [Psun-1::GFPnb::mTagBFP2::6GWKhexamer + SEC] II; par-3(djd6 [EYFP-C1dPi::PAR-3(RRKEEE)]) III
this study UTX106
C.elegans transgenic strain expressing LsfGFP::SNAPf
Genotype: cpIs95[Pmex-5>sfGFP-GLO::3xFlag::SNAPf + SEC] II
this study LP566
Software and Algorithms
Utrack Jaqaman et al. (2008) Version 2.2.0; https://github.com/DanuserLab/u-track
Msdanalyzer Tarantino et al. (2014) https://tinevez.github.io/msdanalyzer/
Ezyfit MATLAB File Exchange Version 2.53; http://www.fast.u-psud.fr/ezyfit
GetClustersize This paper https://github.com/IvyChang1994/getClusterSize.git
PIVLab Thielicke and Stamhuis (2014) Version 2.50; http://pivlab.blogspot.com
PAR-3 diffusion simulation This paper https://github.com/IvyChang1994/Par3-Modeling.git