Antibodies |
Rabbit α-HA-tag, 1:1000 |
Cell signaling |
3724S |
AlexaFluor488-fluorescently-conjugated goat α-rabbit |
Life Technologies |
A-11070 |
Bacterial and virus strains |
AAV-hSyn-HI-eGFP-Cre |
Addgene |
Addgene #: 105540-AAV9 |
AAV-hSyn-EGFP |
Addgene |
Addgene #: 50465-AAV9 |
AAV-hSyn-DIO-mCherry |
Addgene |
Addgene #: 50459-AAV9 and AAVrg |
AAV-hSyn-DIO-EGFP |
Addgene |
Addgene #: 50457-AAVrg |
AAV-EF1a-Flpo |
Addgene |
Addgene #: 55637-AAVrg |
AAV-EF1a-fDIO-Cre |
Addgene |
Addgene #: 121675-AAV9 |
AAV-FLEX-tdTomato |
Addgene |
Addgene #: 28306-PHP.eb |
AAV-TBG-PI-Cre |
Addgene |
Addgene #: 107787-AAV8 |
AAV-TBG-PI-Null |
Addgene |
Addgene #: 105536-AAV8 |
Chemicals, peptides, and recombinant proteins |
|
|
Recombinant human FGF21 |
NovoNordisk |
|
PF-05231023 |
Pfizer |
|
N-Methyl-D-glucamine |
Sigma |
Cat#:M2004 |
KCl |
Research Products International |
Cat#:P41025–500.0 |
NaCl |
Research Products International |
Cat#:S23020–500.0 |
NaH2PO4
|
Research Products International |
Cat#:S23185–500.0 |
NaHCO3
|
Research Products International |
Ca#:S25060–500.0 |
HEPES |
Research Products International |
Cat#:H75030–50.0 |
Glucose |
Research Products International |
Cat#:G32045–500.0 |
MgSO4-7H2O |
Research Products International |
Cat#:M65240–100.0 |
CaCl2-2H2O |
Research Products International |
Cat#:C36200–500.0 |
Sodium Ascorbate |
Research Products International |
Cat#:S42175–100.0 |
Thiourea |
Sigma |
Cat#:T8656 |
Sodium Pyruvate |
Sigma |
Cat#:P2256 |
Pronase |
Roche |
Cat#: 10165921001 |
Fetal Bovine Serum |
Gibco |
Cat#:26140–079 |
CNQX |
Tocris |
Cat#:0190 |
TTX |
Tocris |
Cat#:1078 |
D-AP5 |
Tocris |
Cat#:0106 |
Pertussis Toxin |
Tocris |
Cat#:3097 |
Actinomycin D |
Sigma |
Cat#: A1410
|
|
|
|
Critical commercial assays |
Mouse/Rat FGF21 ELISA |
Biovendor |
Cat#: RD291108200R |
BD Rhapsody Whole Transcriptome Analysis Kit |
BD Biosciences |
Cat#: 633802 |
|
|
|
Deposited data |
Raw and processed scRNAseq data |
Gene Expression Omnibus |
GEO: TBD |
|
|
|
Experimental models: Organisms/strains |
FGF21fl/fl
|
Markan et al., 2014
|
|
FGF21 LivKO |
Markan et al., 2014
|
|
KLBfl/fl
|
Ding et al., 2012
|
|
Ai14-tdTomato |
The Jackson Laboratory |
007914 |
KLB-Cre |
Jensen-Cody and Flippo et al., 2020
|
|
KLB loxTB mice |
This paper |
|
Oligonucleotides |
Klb: 5' - GATGAAGAATTTCCTAAACCAGGTT-3' , 5' - AACCAAACACGCGGATTTC −3' |
von Holstein-Rathlou et al. 2016
|
|
Fgf21: 5'-CCTCTAGGTTTCTTTGCCAACAG-3', 5'-AAGCTGCAGGCCTCAGGAT-3'; |
von Holstein-Rathlou et al. 2016
|
|
Cre: 5'-TGTTGCCGCGCCATCTG-3', 5'-TTGCTTCAAAAATCCCTTCCA-3' |
von Holstein-Rathlou et al. 2016
|
|
U36B4: 5'-CGTCCTCGTTGGAGTGACA-3', 5'-CGGTGCGTCAGGGATTG-3' |
von Holstein-Rathlou et al. 2016
|
|
Software and Algorithms |
ImageJ |
Schneider et al., 2012 |
https://imagej.nih.gov/ij/
|
Seurat |
Stuart and Butler et al., 2019
|
https://satijalab.org/seurat/
|
BD Rhapsody Analysis pipeline |
BD |
sbgenomics.com/bdgenomics
|
Axon pCLAMP 11.3 |
Molecular Devices |
N/A |
R |
The R Project for Statistical Computing
|
https://www.r-project.org/
|
Graphpad Prism 7 |
Graphpad |
http://www.graphpad.com/scientific-software/prism/
|