Table 1.
Top 20 CpGs associated with alcohol consumption in the meta-analysis (N = 8161) along with gene annotations, full gene names, chromosome, and base-pair position of the CpG (Ensembl (v92)).
CpG | Chrom | bp | Gene | Gene name/description | Direction | Z score | p |
---|---|---|---|---|---|---|---|
cg06690548 | 4 | 139162808 | SLC7A11 | Cystine/glutamate transporter | – | −22.06 | 7.75E–108 |
cg06088069 | 14 | 75895604 | JDP2 | Jun dimerization protein 2 | – | −15.849 | 1.44E–056 |
cg06644515 | 1 | 173834831 | GAS5 | Growth arrest-specific 5 | – | −14.445 | 2.71E–047 |
cg12825509 | 3 | 185648568 | TRA2B | Transformer-2 protein homolog beta | – | −13.61 | 3.54E–042 |
cg11376147 | 11 | 57261198 | SLC43A1 | Large neutral amino acids transporter small subunit 3 | – | −13.35 | 1.18E–040 |
cg14476101 | 1 | 120255992 | PHGDH | Phosphoglycerate dehydrogenase | – | −13.34 | 1.33E–040 |
cg18120259 | 6 | 43894639 | LOC100132354 | – | −13.226 | 6.19E–040 | |
cg26457483 | 1 | 120256112 | PHGDH | Phosphoglycerate dehydrogenase | – | −13.185 | 1.07E–039 |
cg12116137 | 17 | 1576449 | PRPF8 | Pre-mRNA-processing-splicing factor 8 | ++ | 12.92 | 3.48E–038 |
cg03497652 | 16 | 4751569 | ANKS3 | Ankyrin Repeat and Sterile Alpha Motif Domain Containing 3 | ++ | 12.49 | 8.12E–036 |
cg25124205 | 6 | 125519976 | TPD52L1 | Tumor protein D53 | – | −12.187 | 3.65E–034 |
cg15837522 | 8 | 117892654 | – | −12.021 | 2.74E–033 | ||
cg16113793 | 18 | 21451607 | LAMA3 | Laminin subunit alpha 3 | ++ | 11.96 | 5.78E–033 |
cg01538969 | 6 | 30624636 | DHX16 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase | ++ | 11.731 | 8.80E–032 |
cg10254445 | 1 | 37197260 | – | −11.684 | 1.54E–031 | ||
cg21912872 | 12 | 68055270 | DYRK2 | Dual specificity tyrosine-phosphorylation-regulated kinase 2 | – | −11.462 | 2.06E–030 |
cg08228578 | 12 | 57624193 | SHMT2 | Serine hydroxymethyltransferase | – | −11.428 | 3.04E–030 |
cg02711608 | 19 | 47287964 | SLC1A5 | Neutral amino acid transporter B(0) | – | −11.211 | 3.61E–029 |
cg12973487 | 19 | 1623075 | TCF3 | Transcription factor 3 | ++ | 11.177 | 5.30E–029 |
cg01307228 | 10 | 90152007 | RNLS | Renalase | – | −11.03 | 2.76E–28 |