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. 2022 Apr 25;25(5):104291. doi: 10.1016/j.isci.2022.104291
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and virus strains

The antarctic strain CCCryo 231-06 (= UTEX EE21; CCMEE 391) of the cyanobacterium Nostoc sp. Biobank CCCryo at Branch Bioanalytics and Bioprocesses of the Fraunhofer Institute for Cell Therapy and Immunology (IZI-BB), Potsdam, Germany CCCryo 231-06

Chemicals, peptides, and recombinant proteins

Pluronic F127 Sigma Aldrich Cat# P2443; CAS: 9003-11-6
PBS Fisher Scientific Cat# BP243820
PDMS Momentive RTV615
UltraPure™ 0.5M EDTA, pH 8.0 ThermoFisher Cat# 15575020
Ready-Lyse™ Lysozyme Solution Lucigen Cat# R1804M
Dithiothreitol (DTT) Bio-rad Cat# 1610611
Low-EDTA TE (1X), pH 8.0 VWR Cat# 10128-588
NEBNext® Multiplex Oligos for Illumina® New England Biolabs Cat# E7335S
SPRIselect Beads Beckman Coulter Cat# B23318

Deposited data

Genome sequence This paper NCBI, accession# PRJNA721463, the locus tag prefix is KBT16.

Experimental models: Organisms/strains

The antarctic strain CCCryo 231-06 (= UTEX EE21; CCMEE 391) of the cyanobacterium Nostoc sp. Biobank CCCryo at Branch Bioanalytics and Bioprocesses of the Fraunhofer Institute for Cell Therapy and Immunology (IZI-BB), Potsdam, Germany CCCryo 231-06

Software and algorithms

Samtools Schneider et al. (2012) http://samtools.sourceforge.net/
BioBloomTools Chu et al. (2014) https://mybiosoftware.com/tag/biobloomtools
Atropos Didion et al. (2017) https://bio.tools/atropos
BBTools https://sourceforge.net/projects/bbmap/, 2019 https://sourceforge.net/projects/bbmap/
MEGAHIT Li et al. (2015) https://bio.tools/megahit
BusyBee Laczny et al. (2017) https://ccb-microbe.cs.uni-saarland.de/busybee
CheckM Parks et al. (2015) https://github.com/Ecogenomics/CheckM
GTDBtk tool Parks et al. (2018) https://github.com/Ecogenomics/GTDBTk
Prokka Seemann et al., 2014 https://github.com/tseemann/prokka
eggNOG mapper Huerta-Cepas al., 2017 https://github.com/eggnogdb/eggnog-mapper
PATRIC Davis et al. (2020) https://www.patricbrc.org/
RAxML Stamatakis et al., 2014 https://cme.h-its.org/exelixis/web/software/raxml/
Dendroscope 3 Huson et al., 2012 https://uni-tuebingen.de/
PHASTER Arndt et al. (2016) https://phaster.ca/

Other

REPLI-g Single Cell Kit Qiagen Cat# 150,343
NEBNext Ultra II DNA Library Prep Kit for Illumina New England Biolabs Cat# E7103
HiSeq 3000/4000 PE Cluster Kit Illumina Cat# PE-410-1001
HiSeq 3000/4000 SBS Kit (300 cycles) Illumina Cat# FC-410-1003