Table 1.
Taxonomy, ST, isolate source, country of origin and resistance genes of the isolates
| Order nr | ANIb | ST | Isolate source | Country | Resistance genes |
|---|---|---|---|---|---|
| 543,227 | A | 89 | CF | Northern Ireland | – |
| 533,506 | A | 215 | CF | the Netherlands | – |
| 534,845 | A | 549 | CF | Spain | – |
| 534,836 | B | 130 | CF | Spain | – |
| 546,334 | C | 133 | other | Northern Ireland | – |
| 543,210 | D | 536 | CF | Northern Ireland | – |
| 533,529 | D | 337 | CF | the Netherlands | – |
| 534,834 | D | 337 | CF | Spain | – |
| 533,533 | E | 39 | CF | the Netherlands | – |
| 534,812 | E | 39 | CF | Spain | – |
| 534,818 | E | 39 | CF | Spain | aac(6′)-Iz |
| 542,535 | E | 39 | CF | Northern Ireland | – |
| 543,206 | E | 39 | CF | Northern Ireland | – |
| 543,208 | E | 39 | CF | Northern Ireland | – |
| 543,215 | E | 39 | CF | Northern Ireland | – |
| 543,217 | E | 39 | CF | Northern Ireland | – |
| 546,336 | E | 39 | other | Northern Ireland | – |
| 543,216 | E | 180 | CF | Northern Ireland | – |
| 542,523 | F | 535 | CF | Northern Ireland | |
| 542,525 | F | 535 | CF | Northern Ireland | |
| 542,527 | F | 535 | CF | Northern Ireland | |
| 542,530 | F | 535 | CF | Northern Ireland | |
| 543,225 | F | 535 | CF | Northern Ireland | |
| 547,141 | F | 535 | CF | Northern Ireland | |
| 548,978 | F | 535 | other | Northern Ireland | |
| 534,846 | G | 537 | CF | Spain | – |
| 543,222 | H | 79 | CF | Northern Ireland | – |
| 533,514 | H | 545 | CF | the Netherlands | – |
| 548,948 | I | 34 | other | the Netherlands | – |
| 534,842 | J | 548 | CF | Spain | – |
| 533,515 | K | 29 | CF | the Netherlands | – |
| 533,513 | K | 77 | CF | the Netherlands | – |
| 543,213 | K | 77 | CF | Northern Ireland | – |
| 548,945 | K | 219 | other | Northern Ireland | – |
| 533,531 | K | 224 | CF | the Netherlands | – |
| 534,799 | K | 538 | CF | Spain | – |
| 534,811 | L | 15 | CF | Spain | – |
| 542,542 | L | 15 | CF | Northern Ireland | – |
| 534,821 | M | 533 | CF | Spain | aac(6′)-Ib3, ant(2″)-Ia, aac(6′)-Ib-cr |
| 534,822 | M | 534 | CF | Spain | aac(6′)-Ib3, ant(2″)-Ia, aac(6′)-Ib-cr |
| 533,501 | S. maltophilia | 4 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 533,507 | S. maltophilia | 4 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 533,524 | S. maltophilia | 4 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 533,532 | S. maltophilia | 4 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 533,534 | S. maltophilia | 4 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 534,831 | S. maltophilia | 4 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,838 | S. maltophilia | 4 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 542,522 | S. maltophilia | 4 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 548,946 | S. maltophilia | 4 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 533,502 | S. maltophilia | 5 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz, aph(3″)-Ib, aph(6)-Id |
| 533,518 | S. maltophilia | 5 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 534,802 | S. maltophilia | 5 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,804 | S. maltophilia | 5 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz, aph(6)-Id, aph(4)-Ia, aac(6′)-Ib-cr, aph(3″)-Ib, aac(3)-IV, aph(3′)-Ia, aac(6′)-Ib-Hangzhou, tet(G), sul1, cmx |
| 534,807 | S. maltophilia | 5 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,823 | S. maltophilia | 5 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,825 | S. maltophilia | 5 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,829 | S. maltophilia | 5 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,839 | S. maltophilia | 5 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,843 | S. maltophilia | 5 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 540,831 | S. maltophilia | 5 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz, aph(6)-Id, aac(6′)-Ib-cr, aph(3″)-Ib, aac(6′)-Ib3, ant(2″)-Ia, sul1 |
| 542,536 | S. maltophilia | 5 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 542,538 | S. maltophilia | 5 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 542,539 | S. maltophilia | 5 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 543,203 | S. maltophilia | 5 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 543,219 | S. maltophilia | 5 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 546,340 | S. maltophilia | 5 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 546,343 | S. maltophilia | 5 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 547,144 | S. maltophilia | 5 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 547,147 | S. maltophilia | 5 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz, aph(3″)-Ib, aph(6)-Id |
| 548,947 | S. maltophilia | 5 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 533,517 | S. maltophilia | 8 | CF | the Netherlands | aph(3′)-IIc |
| 534,844 | S. maltophilia | 26 | CF | Spain | aph(3′)-IIc |
| 542,532 | S. maltophilia | 26 | CF | Northern Ireland | aph(3′)-IIc |
| 542,534 | S. maltophilia | 26 | CF | Northern Ireland | aph(3′)-IIc |
| 543,223 | S. maltophilia | 26 | CF | Northern Ireland | aph(3′)-IIc |
| 533,525 | S. maltophilia | 27 | CF | the Netherlands | aph(3′)-IIc |
| 533,509 | S. maltophilia | 31 | CF | the Netherlands | aph(3′)-IIc |
| 533,530 | S. maltophilia | 31 | CF | the Netherlands | aph(3′)-IIc |
| 546,338 | S. maltophilia | 31 | CF | Northern Ireland | aph(3′)-IIc |
| 534,806 | S. maltophilia | 84 | CF | Spain | aph(3′)-Iic, aac(3)-IV, aph(3″)-Ib, aph(6)-Id, aph(4)-Ia, drfA15, tet(A), sul1 |
| 534,817 | S. maltophilia | 92 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,840 | S. maltophilia | 146 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,835 | S. maltophilia | 162 | CF | Spain | aph(3′)-IIc |
| 543,221 | S. maltophilia | 162 | CF | Northern Ireland | aph(3′)-IIc |
| 546,339 | S. maltophilia | 162 | CF | the Netherlands | aph(3′)-IIc |
| 547,143 | S. maltophilia | 162 | CF | Northern Ireland | aph(3′)-IIc |
| 548,949 | S. maltophilia | 162 | CF | the Netherlands | aph(3′)-IIc |
| 548,950 | S. maltophilia | 199 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 533,512 | S. maltophilia | 246 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 534,832 | S. maltophilia | 246 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 543,220 | S. maltophilia | 531 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 534,809 | S. maltophilia | 532 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 533,510 | S. maltophilia | 539 | CF | the Netherlands | aph(3′)-IIc |
| 533,527 | S. maltophilia | 540 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 533,528 | S. maltophilia | 541 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 539,959 | S. maltophilia | 541 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 534,828 | S. maltophilia | 542 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,808 | S. maltophilia | 543 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 534,801 | S. maltophilia | 544 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 543,211 | S. maltophilia | 546 | CF | Northern Ireland | aph(3′)-IIc |
| 534,805 | S. maltophilia | 547 | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 546,337 | S. maltophilia | 550 | CF | Northern Ireland | aph(3′)-IIc, aac(6′)-Iz |
| 546,342 | S. maltophilia | 551 | CF | the Netherlands | aph(3′)-IIc, aac(6′)-Iz |
| 547,148 | S. maltophilia | 539 | other | Northern Ireland | aph(3′)-IIc |
| 534,819 | S. maltophilia | xxa | CF | Spain | aph(3′)-IIc, aac(6′)-Iz |
| 547,145 | S. pavanii | 23 | other | Northern Ireland | aac(6′)-Iak |
| 534,815 | S. pavanii | 24 | CF | Spain | aac(6′)-Iak |
| 545,270 | S. pavanii | 220 | other | USA | aac(6′)-Iak |
| 534,800 | S. pavanii | 233 | CF | Spain | aac(6′)-Iak |
| 542,603 | S. pavanii | 233 | CF | Australia | aac(6′)-Iak |
| 533,516 | S. pavanii | 306 | CF | the Netherlands | aac(6′)-Iak |
axx no ST available because allele mutM is partially deleted
Taxonomy, ST, isolate source, country of origin and resistance genes of the isolates used in this study