Skip to main content
. 2022 Apr 22;25(5):104282. doi: 10.1016/j.isci.2022.104282
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Phospho-eIF2a_Ser51 Cell Signaling Technology Cat# 3597; RRID:AB_390740
EIF2ΑK1/HRI Proteintech Cat# 20499-1-AP; RRID:AB_10697665
EIF2ΑK1/HRI Abcam Cat# ab28530; RRID:AB_869595
Anti-Bag3 Proteintech Cat# 10599-1-AP; RRID:AB_2062602
β-actin Novus Cat# NB600-501; RRID:AB_10077656
a-K48 Ubiquitin linkage antibody BostonBiochem Cat#A101-050; RRID:AB_2894847

Chemicals, peptides, and recombinant proteins

JG98 AdooQ BIOSCIENCE Catalog No.: A18734
MG132 Biomol LKT-M2400.5
DAPI (4′,6-Diamidine-2′-phenylindole dihydrochloride) Sigma Cat# 10236276001
Formaldehyde Sigma Cat#FX0415
Blasticidin S HCl Thermo Fisher Cat# A1113903
Recombinant Human His6-Ubiquilin-1 Tandem UBA BostonBiochem UBE110
Qiagen RNeasy Plus Mini kit Qiagen;GmbH Cat. #74134
qScript cDNA Synthesis Kit Quanta Bio Cat. #95047-100
PerfeCTa SYBR Green FastMix ROX Quanta Bio Cat. #95073-012
DMEM/F-12 1:1 BI-Biologicals Cat# 01-170-1A
horse serum BI-Biologicals Cat. #04-0041A
epidermal growth factor Peprotech Cat. #AF-100-15
Hydrocortisone Sigma Cat. #H-0888
human insulin Sigma Cat. #I9278
cholera toxin Sigma Cat. #C-8052
Fetal Bovine Serum BI-Biologicals Cat. #04-007-1A
L-glutamine BI-Biologicals Cat. #03-020-1B
L-alanyl-L-glutamine BI-Biologicals Cat. #03-022-1B
Penstrep BI-Biologicals Cat. #03-031-1B
HisPur Ni-NTA Resin ThermoFisher Scientific Cat. #88221
RNeasy Mini kit Qiagen Cat. #74104

Deposited data

Transcriptome analysis GEO GSE171440

Experimental models: cell lines

MCF10A (human breast epithelial) ATCC Cat# CRL-10317; RRID:CVCL_0598
HEK293T ATCC Cat# CRL-3216, RRID:CVCL_0063

Oligonucleotides

Supplement table See Tables S3 and S4 N/A

Software and algorithms

Hermes Wiscon Imaging System with Athena Winsoft software package (V1.0.10) IDEA Bio-Medical Ltd RRID:SCR_021786
Fiji-ImageJ ImageJ RRID:SCR_002285
limma package R-package LIMMA, RRID:SCR_010943
Gene Set Enrichment Analysis Broad Institute RRID:SCR_003199
GraphPad Prism_v9 GraphPad Software Inc GraphPad Prism, RRID:SCR_002798
trim_galore_v0.5.0 Babraham Bioinformatics Trim Galore, RRID:SCR_011847
FastQC_v0.11.7 Babraham Bioinformatics FastQC, RRID:SCR_014583
Hisat2_v2.1.0 daehwankimlab HISAT2, RRID:SCR_015530
GRch38.97 UCSC NA
samtools_v1.9 N/A SAMTOOLS, RRID:SCR_002105
featureCounts_v1.6.3 N/A featureCounts, RRID:SCR_012919
Bioconductor packages Bioconductor RRID:SCR_006442