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. 2022 May 12;12:7797. doi: 10.1038/s41598-022-11790-9

Table 2.

Summary of computational analysis of DNA polymorphisms found in pfk13 in Ghanaian isolates by location, year and ecological zones. The computational analysis of the sequences to reveal the nucleotide diversity of the mutations in the pfk13 gene in Ghanaian isolates for study sites, year and ecological zones.

π S Tajima's D T’s D p value No. of haplotypes/haplotype diversity (h/Hd)
A. Location
Accra 0.00395 136 − 2.70944  < 0.001 29 (0.926)
Begoro 0.00418 222 − 2.80559  < 0.001 30 (0.759)
Bekwai 0.00589 232 − 2.66217  < 0.001 28 (0.754)
CapeCoast 0.00315 247 − 2.87368  < 0.001 48 (0.722)
Hohoe 0.00154 138 − 2.89841  < 0.001 44 (0.686)
Koforidua 0.00096 102 − 2.70784  < 0.001 28 (0.472)
Navrongo 0.00299 276 − 2.91636  < 0.001 41 (0.607)
Sunyani 0.00415 164 − 2.64914  < 0.001 22 (0.614)
Tarkwa 0.01467 89 − 1.15583  > 0.10 6 (1.000)
Wa 0.00303 87 − 2.55226  < 0.001 24 (0.906)
Total 0.00383 1034 − 2.85874  < 0.001 307 (0.6887)
B. Year
2007 0.00919 305 − 2.78904  < 0.001 23 (0.829)
2010 0.00798 344 − 2.74562  < 0.001 32 (0.666)
2012 0.00255 132 − 2.80328  < 0.001 18 (0.468)
2014 0.00688 255 − 2.57399  < 0.001 51 (0.879)
2016 0.00289 767 − 2.9292  < 0.001 186 (0.7127)
2017 0.00097 102 − 2.92075  < 0.001 28 (0.474)
Total 0.00383 1034 − 2.85874  < 0.001 307 (0.6887)
C. Ecological zones
Coastal 0.00504 460 − 2.9099  < 0.001 82 (0.827)
Forest 0.00326 706 − 2.88742  < 0.001 159 (0.6300)
Savannah 0.00458 491 − 2.94234  < 0.001 71 (0.731)
Total 0.00383 1034 − 2.85874  < 0.001 307 (0.6887)

S—number of segregating sites in the gene; π—nucleotide diversity at the gene locus.