TABLE 1.
Kingdom | Sample name1 | Raw reads | Clean reads | Bases (nt) | Average length (nt) | Number of OTUs |
Bacteria | JK1 | 96,717 | 91,435 | 26,484,462 | 406 | 98 |
Bacteria | JK2 | 90,456 | 85,532 | 26,878,593 | 406 | 108 |
Bacteria | JK3 | 91,273 | 86,659 | 24,974,300 | 406 | 98 |
Bacteria | GB1 | 83,895 | 79,231 | 25,489,125 | 406 | 110 |
Bacteria | GB2 | 88,806 | 83,456 | 26,754,105 | 424 | 96 |
Bacteria | GB3 | 84,731 | 80,766 | 26,637,397 | 406 | 66 |
Fungi | JK1 | 62,893 | 61,822 | 18,501,997 | 300 | 29 |
Fungi | JK2 | 98,602 | 96,874 | 18,344,049 | 300 | 24 |
Fungi | JK3 | 81,344 | 79,633 | 20,840,030 | 299 | 24 |
Fungi | GB1 | 90,234 | 88,237 | 17,955,023 | 294 | 59 |
Fungi | GB2 | 85,798 | 85,388 | 13,777,273 | 204 | 41 |
Fungi | GB3 | 99,549 | 96,046 | 18,698,034 | 291 | 49 |
1JK, asymptomatic leaf; GB, symptomatic leaf.