| AQ | amodiaquine |
| Arg | Arginase |
| Atg5 | Autophagy Related 5 |
| Axin1 | axis inhibition protein 1 |
| bHLH-ZIP | basic helix-loop-helix leucine zipper |
| CA | cleistanthin A |
| CA-074 | cathepsin B inhibitor |
| CEP | cepharanthine |
| Chk1 | Checkpoint kinase 1 |
| CLEAR | coordinated lysosomal expression and regulation |
| CYT | cytolytic activity |
| DDX21 | DExD-Box Helicase 21 |
| ER | Endoplasmic Reticulum |
| Ets1 | ETS Proto-Oncogene 1, Transcription Factor |
| GSK3 | Glycogen synthase kinase-3 |
| HCQ | Hydroxychloroquine |
| LAMP | Lysosomal Associated Membrane Protein |
| LC3 | light chain 3 |
| Lys05 | autophagy inhibitor |
| MCOLN1 | Ca2+ channel mucolipin 1 |
| MAPK | Mitogen-Activated Protein Kinase |
| MITF | micropthalmia-associated transcription factor |
| MiT/TFE | microphthalmia/transcription factor E |
| MMP | matrix metallopeptidase |
| mTORC1 | mammalian target of rapamycin complex 1 |
| MVB | multivesicular body |
| NF-κB | nuclear factor kappa-light-chain-enhancer of activated B cells |
| NNMT | nicotinamide N-methyltransferase |
| p21 | cyclin-dependent kinase inhibitor 1 |
| PON2 | paraoxonase-2 |
| PRL3 | Phosphatase of regenerating liver 3 |
| Rab | Ras-Associated Protein |
| RagD | Ras related GTP binding D |
| ROS | reactive oxidative species |
| shRNA | short hairpin RNA |
| SNAP-23 | Synaptosome Associated Protein 23 |
| Sp1 | Sp1 Transcription Factor |
| TEM | temsirolimus |
| TFE3 | Transcription Factor Binding To IGHM Enhancer 3\ |
| TFEB | Transcription Factor EB |
| TFEC | Transcription Factor EC |
| TGF-β | Transforming growth factor β |
| v-ATPase | Vacuolar-type ATPase |
| Wnt | Wingless and Int-1 |