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. 2022 May;32(5):893–903. doi: 10.1101/gr.276387.121

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© 2022 Markello et al.; Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see https://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

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Figure 1. — Toil-VG-Pedigree workflow. Dotted lines indicate optional pathways in the workflow. (A) Overall workflow diagram. (B) Single sample alignment and variant calling workflow. (C) Trio joint-genotyping and phasing workflow. (D) Parental graph construction workflow. (E) Workflow for preprocessing and annotation of pedigree variants required for candidate analysis. (F) The candidate analysis workflow.