Table 7.
Term ID all DEPs | Kegg Pathways | Observed | Background | Strength | FDR |
---|---|---|---|---|---|
hsa04060 | Cytokine−cytokine receptor interaction | 34 | 282 | 1.56 | 1.29 × 10−41 |
hsa04061 | Viral protein interaction with cytokine and cytokine receptor | 20 | 96 | 1.8 | 1.84 × 10−27 |
hsa05200 | Pathways in cancer | 29 | 517 | 1.23 | 4.06 × 10−26 |
hsa04630 | JAK−STAT signaling pathway | 20 | 160 | 1.58 | 9.98 × 10−24 |
hsa05163 | Human cytomegalovirus infection | 20 | 218 | 1.44 | 2.47 × 10−21 |
hsa04657 | IL−17 signaling pathway | 16 | 92 | 1.72 | 6.43 × 10−21 |
hsa04668 | TNF signaling pathway | 16 | 112 | 1.63 | 9.65 × 10−20 |
hsa04151 | −Akt signaling pathway | 20 | 350 | 1.24 | 1.05 × 10−17 |
hsa04659 | Th17 cell differentiation | 14 | 101 | 1.62 | 4.40 × 10−17 |
hsa05162 | Measles | 15 | 138 | 1.51 | 5.89 × 10−17 |
hsa04010 | MAPK signaling pathway | 18 | 288 | 1.27 | 1.41 × 10−16 |
hsa04061 | Viral protein interaction with cytokine and cytokine receptor | 22 | 96 | 1.84 | 2.86 × 10−31 |
Term ID Cluster 2 | Kegg Pathways | Observed | Background | Strength | FDR |
hsa04015 | Rap1 signaling pathway | 9 | 202 | 1.76 | 2.63 × 10−12 |
hsa04014 | Ras signaling pathway | 9 | 226 | 1.72 | 3.50 × 10−12 |
hsa04010 | MAPK signaling pathway | 9 | 288 | 1.61 | 1.95 × 10−11 |
hsa05205 | Proteoglycans in cancer | 8 | 196 | 1.73 | 6.14 × 10−11 |
hsa04151 | −Akt signaling pathway | 9 | 350 | 1.53 | 6.47 × 10−11 |
hsa01521 | EGFR tyrosine kinase inhibitor resistance | 6 | 78 | 2 | 1.41 × 10−09 |
hsa05200 | Pathways in cancer | 8 | 517 | 1.31 | 6.63 × 10−08 |
hsa05418 | Fluid shear stress and atherosclerosis | 5 | 130 | 1.7 | 1.73 × 10−06 |
hsa05230 | Central carbon metabolism in cancer | 4 | 69 | 1.88 | 8.78 × 10−06 |
hsa04510 | Focal adhesion | 5 | 198 | 1.52 | 1.06 × 10−05 |
hsa04810 | Regulation of actin cytoskeleton | 5 | 209 | 1.49 | 1.25 × 10−05 |
Term ID Cluster 2 | GO Biological Processes | Observed | Background | Strength | FDR |
GO:0001525 | Angiogenesis | 12 | 315 | 1.7 | 2.15 × 10−15 |
GO:0001936 | Regulation of endothelial cell proliferation | 9 | 134 | 1.94 | 4.05 × 10−13 |
GO:0001938 | Positive regulation of endothelial cell proliferation | 8 | 94 | 2.05 | 3.65 × 10−12 |
GO:0010595 | Positive regulation of endothelial cell migration | 8 | 103 | 2.01 | 6.16 × 10−12 |
GO:0050679 | Positive regulation of epithelial cell proliferation | 9 | 192 | 1.79 | 6.16 × 10−12 |
GO:0007169 | Transmembrane receptor protein tyrosine kinase signaling pathway | 11 | 518 | 1.44 | 6.18 × 10−12 |
GO:0050678 | Regulation of epithelial cell proliferation | 10 | 339 | 1.59 | 7.25 × 10−12 |
GO:0038084 | Vascular endothelial growth factor signaling pathway | 6 | 20 | 2.59 | 1.25 × 10−11 |
GO:0008284 | Positive regulation of cell population proliferation | 12 | 919 | 1.23 | 3.76 × 10−11 |
GO:0071363 | Cellular response to growth factor stimulus | 10 | 494 | 1.42 | 1.75 × 10−10 |
KEGG: Kyoto Encyclopedia of Genes and Genomes; ID: Identification; FDR: False Discovery Rate; DEP: differentially expressed proteins.