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. Author manuscript; available in PMC: 2022 Aug 1.
Published in final edited form as: Nat Protoc. 2021 Jun 28;16(8):3874–3900. doi: 10.1038/s41596-021-00562-w

Table 4.

Details of colon seeding medium composition and preparation

Component Stock concentration Volume added Final concentration Recommended storage condition

WRN-conditioned media 100× 6.5 ml 65× −20 °C freezer
Base media* 100× 3.2 ml* 32× 4 °C fridge
B27 50× 200 μl −20 °C freezer
N2 100× 100 μl −20 °C freezer
N-acetyl cysteine 500 mM 10 μl 500 μM −20 °C freezer
A83-01 500 μM 10 μl 500 nM −20 °C freezer
Thiazovivin** 6.25 mM 4 μl 2.5 μM −80 °C freezer
SB202190 30 mM 3.33 μl 10 μM −20 °C freezer
EGF 250 μg/ml 2 μl 50 ng/ml −20 °C freezer
human [Leu15]-Gastrin 100 μM 1 μl 10 nM −20 °C freezer
Prostaglandin E2 10 mM 2 μl*** 5 nM −80 °C freezer
Final volume 10.03 ml
*

Base media consists of Advanced DMEM/F12, 2mM Glutamax, 10 mM HEPES, 100 units/ml penicillin/streptomycin as described in Table 1.

**

Nicotinamide is removed and thiazovivin is used instead of Y-27632 dihydrochloride in seeding medium to allow differentiation into secretory cell types in monolayers as reported by Kozuka et al.27

***

Prostaglandin E2 should be diluted before use. Make a dilution of 1 μl PGE stock to 349 pl base media. Add 2 μl PGE dilution for 10 ml media