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. 2022 Apr 21;12(2):290–302. doi: 10.5455/OVJ.2022.v12.i2.18

Table 1. Primers and amplicon sizes of the amplified products and specific annealing temperatures.

M.Os Target gene Primers sequences Amplicon size (bp) Amplification (35 cycles)
Denaturation Annealing Extension
E. coli fimH TGCAGAACGGATAAGCCGTGG
GCAGTCACCTGCCCTCCGGTA
508 94°C
30 seconds
50°C
45 seconds
72°C
45 seconds
papC TGATATCACGCACTCAGTAGC
CCGGCCATATTCACATAA
501 94°C
30 seconds
58°C
40 seconds
72°C
45 seconds
iss ATGTTATTTTCTGCCGCTCTG
CTATTGTGAGCAATATACCC
226 94°C
30 seconds
54°C
30 seconds
72°C
30 seconds
iutA GGCTGGACATGGGAACTGG
CGTCGGGAACGGGTAGAATCG
300 94°C
30 seconds
63°C
30 seconds
72°C
30 seconds
blaCTX-M ATG TGC AGY ACC AGT AAR GTK ATG GC
TGG GTR AAR TAR GTS ACC AGA AYC AGC GG
593 94°C
30 seconds
54°C
40 seconds
72°C
45 seconds
bla TEM ATCAGCAATAAACCAGC
CCCCGAAGAACGTTTTC
516 94°C
30 seconds
54°C
40 seconds
72°C
45 seconds
tetA GGTTCACTCGAACGACGTCA
CTGTCCGACAAGTTGCATGA
576 94°C
30 seconds
50°C
40 seconds
72°C
45 seconds
S. aureus mecA GTA GAA ATG ACT GAA CGT CCG ATA A
CCA ATT CCA CAT TGT TTC GGT CTA A
310 94°C
30 seconds
50°C
30 seconds
72°C
40 seconds
coa ATA GAG ATG CTG GTA CAG G
GCT TCC GAT TGT TCG ATG C
630 94°C
30 seconds
55°C
40 seconds
72°C
40 seconds
spa TCA ACA AAG AAC AAC AAA ATG C
GCT TTC GGT GCT TGA GAT TC
226 94°C
30 seconds
50°C
30 seconds
72°C
40 seconds
tetK GTAGCGACAATAGGTAATAGT
GTAGTGACAATAAACCTCCTA
364 94°C
30 seconds
54°C
40 seconds
72°C
40 seconds