Table 4.
Reference viruses in the genus AlphaCoV and BetaCoV - Set 3.
| Virus (Accession Number) | Taxonomy | Virus (Accession Number) | Taxonomy |
|---|---|---|---|
| Transmissible gastroenteritis virus (TGEV) (NC_038861) | AlphaCoV | SARS CoV BJ01 (AY278488) | BetaCoV; Sarbecovirus |
| Mink CoV WD1127 (NC_023760) | AlphaCoV | Bat SARS CoV RsSHC014 (KC881005) | BetaCoV; Sarbecovirus |
| Porcine epidemic diarrhea virus (PEDV) (NC_003436) | AlphaCoV | Bat SARS CoV WIV1 (KF367457) | BetaCoV; Sarbecovirus |
| Rhinolophus bat CoV HKU2 (NC_009988) | AlphaCoV | Bat SARS CoV Rp3 (DQ071615) | BetaCoV; Sarbecovirus |
| Human CoV 229E (NC_002645) | AlphaCoV | Bat SARS CoV Rs672/2006 (FJ588686) | BetaCoV; Sarbecovirus |
| Human CoV NL63 (NC_005831) | AlphaCoV | Bat SARS CoV Rf1 (DQ412042) | BetaCoV; Sarbecovirus |
| Human CoV OC43 (NC_006213) | BetaCoV; Embecovirus | Bat SARS CoV Longquan-140 (KF294457) | BetaCoV; Sarbecovirus |
| Murine hepatitis virus (MHV) (AC_000192) | BetaCoV; Embecovirus | Bat SARS CoV HKU3–1 | BetaCoV; Sarbecovirus |
| Rousettus bat CoV HKU9 (NC_009021) | BetaCoV; Nobecovirus | Bat SARS CoV ZXC21 (MG772934) | BetaCoV; Sarbecovirus |
| Rousettus bat CoV GCCDC1 (NC_030886) | BetaCoV; Nobecovirus | Bat SARS CoV ZC45 (MG772933) | BetaCoV; Sarbecovirus |
| MERS CoV (NC_019843) | BetaCoV; Merbecovirus | Bat CoV RaTG13 (MN996532) | BetaCoV; Sarbecovirus |
| Pipistrellus bat CoV HKU5 (NC_009020) | BetaCoV; Merbecovirus | Guangxi pangolin CoV GX/P4L (EPI_ISL_410538) | BetaCoV; Sarbecovirus |
| Tylonycteris bat CoV HKU4 (NC_009019) | BetaCoV; Merbecovirus | Guangxi pangolin CoV GX/P1E (EPI_ISL_410539) | BetaCoV; Sarbecovirus |
| Bat Hp-betaCoV/Zhejiang2013 (NC_025217) | BetaCoV; Hibecovirus | Guangxi pangolin CoV GX/P5L (EPI_ISL_410540) | BetaCoV; Sarbecovirus |
| SARS CoV BtKY72 (KY352407) | BetaCoV; Sarbecovirus | Guangxi pangolin CoV GX/P5E (EPI_ISL_410541) | BetaCoV; Sarbecovirus |
| Bat CoV BM48-31/BGR/2008 (GU190215) | BetaCoV; Sarbecovirus | Guangxi pangolin CoV GX/P2V (EPI_ISL_410542) | BetaCoV; Sarbecovirus |
| SARS CoV LC5 (AY395002) | BetaCoV; Sarbecovirus | Guangxi pangolin CoV GX/P3B (EPI_ISL_410543) | BetaCoV; Sarbecovirus |
| SARS CoV SZ3 (AY304486) | BetaCoV; Sarbecovirus | Guangdong pangolin CoV (EPI_ISL_410721) | BetaCoV; Sarbecovirus |
| SARS CoV Tor2 (AY274119) | BetaCoV; Sarbecovirus |