Table 2.
Number of genes significantly more present in Prunus spp. isolated strains.
| p-value | LR value | Number of genes | Proportion (%) | |||
|---|---|---|---|---|---|---|
| Expected1 | Observed | Retained2 | Tested3 | Flexible4 | ||
| 0.05 | 5.36 | 3 | 19 | 13 | 38.78 | 1.80 |
| 0.01 | 6.40 | <1 | 17 | 12 | 34.69 | 1.61 |
| 0.001 | 9.08 | <1 | 11 | 7 | 22.45 | 1.04 |
| 0.0001 | 12.62 | <1 | 3 | 3 | 6.12 | 0.28 |
| 0.00001 | 12.63 | <1 | 3 | 3 | 6.12 | 0.28 |
1
Expected number of Type I (false-positive) errors under the null model.
2
Retained based on the criteria present in 60% of the Prunus isolated strains.
3
Proportion of the 49 tested genes (three genes skipped based on the criteria occurring in either greater than six or fewer than 92 strains).
4
Proportion of the total flexible genome of subsets A-D (1,058 genes).