Skip to main content
. 2022 May 16;14:63. doi: 10.1186/s13148-022-01282-y

Table 3.

Primer sets used for pyrosequencing and transcriptional analysis used in this study, including RT-qPCR

Application Name Oligo sequence (5′–3′)
Pyrosequencing pyro_MIR4520A_FW GTTTAAATTTTTTTTTGATTTGGATAGAAA
pyro_MIR4520A_RV AAAACATACCCTCAATTCCAAAAAAAT C
pyro_MIR4520A_Seq TTTTTTTTGATTTGGATAGAAAATA
pyro_PRKAR1b/HEATR2_Promoter_FW TTTAGGGGTAGGTTTAGGTTTATAGT
pyro_PRKAR1b/HEATR2_Promoter_RV CCAACCTACCTACTAAACCTTATC
pyro_PRKAR1b/HEATR2_Promoter_Seq GGTAGGTTTAGGTTTATAGTT
pyro_PRKAR1b_GB_FW GGTTTTATAGGGATGAGGTTTTATGTATAG
pyro_PRKAR1b_GB_RV ACCACCCACAACATCAAACAAA
pyro_PRKAR1b_GB_Seq AGGTTTTATGTATAGGGTAT
pyro_HEATR2_GB_FW GGTAGGGAGGTATTTGGTTTAAGA
pyro_HEATR2_GB_RV TAAAACCCCCCCACCTACCCTTACC
pyro_HEATR2_GB_Seq GGGAGGTATTTGGTTTAAGATT
pyro_DUSP22_FW GTGAGGTTTGAGGTTAGAGATTTAG
pyro_DUSP22_RV ATCTCCAAATCCCCCTTTAACC
pyro_DUSP22_Seq TTTAGGGTAGGGAGG
pyro_CES1_FW GGTTGGTCGGGTTTAGTTGTTTTAAG
pyro_CES1_RV AAACAACACAATCCCTCTAAACTAC
pyro_CES1_Seq TTAAGTTTAAGTTTTAATATGGAA
RT-qPCR qPCR_PRKAR1b_GB_FW ACAGGGGAGTGAGGTGAGTG
qPCR_PRKAR1b_GB_RV TCTTTGAGGACCTGCTGGAT
qPCR_HEATR2_FW AGCCCTGGCGTCGTGATTAGT
qPCR_HEATR2_RV CCCGTTGAGCACACAGAGGCCTA
qPCR_DUSP22_FW CGCTGACTTGTTGACACTGC
qPCR_DUSP22_RV GCTCAATTGTTCCGCGTCTC
qPCR_CES1_FW TTGCTGCCCATGAAAACGTG
qPCR_CES1_RV GCATTGGAATCAACCAGCC
HPRT_FW AGCCCTGGCGTCGTGATTAGT
HPRT_RV CCCGTTGAGCACACAGAGGCCTA

Pyroassay primers are given as bisulphite-converted