Table 3.
Artificial Intelligence based prediction on methylation of cf-DNA Lung Cancer for the non-coding region CpGs (top 10 Variables).
| SVM | GLM | PAM | RF | LDA | DL | |
|---|---|---|---|---|---|---|
| AUC 95% CI | 1.0000 (0.9000-1) | 1.0000 (0.9000-1) | 0.9900 (0.8900-1) | 1.0000 (0.9000-1) | 1.0000 (0.9000-1) | 1.0000 (0.9500-1) |
| Sensitivity | 0.9300 | 0.9600 | 0.9700 | 0.9800 | 0.9400 | 1.0000 |
| Specificity | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 1.0000 | 1.0000 |
CpG predictors in order of contribution:
SVM: cg16349277, cg10302285, cg21127580, cg07591229, cg15455979, cg13645106, cg05458412, cg00316520, cg14185604, cg02475408.
GLM: cg08090691, cg19319928, cg17373554, cg02821627, cg07099084, cg14852082, cg20802868, cg09853648, cg07877987, cg03388189.
PAM: cg05062489, cg09295542, cg06105068, cg24524245, cg19216204, cg03388189, cg06723904, cg13645106, cg12629103, cg02984449.
RF: cg07828654, cg02475408, cg14661028, cg03449513, cg22887498, cg10302285, cg26201011, cg08505243, cg20216928, cg04424605.
LDA: cg24196351, cg14071171, cg14559409, cg07892140, cg12629103, cg10430189, cg06723904, cg05909891, cg09295542, cg17001531.
DL: cg05458412, cg07652774, cg26399254, cg15398272, cg15125549, cg14852082, cg12629103, cg01076051, cg10086080, cg08852943.