TABLE 2.

Output statistics of the sequencing reads for each sample.

Sample Name	Raw Reads	Clean Reads	Clean Bases (G)	Error rate (%)	Q20 (%)	Q30 (%)	GC content (%)
IMA1	106965744	104026824	15.6	0.01	97.43	93.49	46.19
IMA2	97739340	95783582	14.37	0.01	97.38	93.41	45.44
IMA3	100355022	98296238	14.74	0.02	97.28	93.19	46.19
IMA4	87081698	85127438	12.77	0.02	97.30	93.26	45.62
IMA5	93900560	92052240	13.81	0.01	97.33	93.31	45.94
IMPA1	89914112	87780640	13.17	0.02	96.88	92.26	50.48
IMPA2	89869988	87544572	13.13	0.02	96.76	92.01	49.14
IMPA3	86513066	84676776	12.7	0.02	96.89	92.26	51.41
IMPA4	93072522	91173148	13.68	0.01	97.45	93.47	49.64
IMPA5	103727284	1,00918664	15.14	0.02	96.27	91.00	51.62
SA1	102257046	96016600	14.4	0.01	97.19	93.12	45.12
SA2	113958516	107224614	16.08	0.01	97.21	93.11	45.29
SA3	96569252	90603612	13.59	0.02	97.01	92.44	44.74
SA4	92196036	86251102	12.94	0.02	97.24	92.92	44.74
SA5	8,9102014	86443762	12.97	0.02	96.54	91.61	45.44
SPA1	89233018	87343234	13.1	0.02	97.03	92.56	45.46
SPA2	112263802	105239820	15.79	0.02	97.12	92.97	45.32
SPA3	119992036	112810026	16.92	0.02	97.08	92.87	45.82
SPA4	116537456	109357518	16.4	0.02	97.18	93.04	45.78
SPA5	128978020	121273002	18.19	0.02	97.15	93.00	45.75