Table 2.

Estimates of SNP heritability on UKBB traits that are significantly different using LDER and LDSC

UKBB ID	Phenotype	Variable type	$h_{LDER}^2$	$h_{LDSC}^2$	p value (different)
1210	snoring	binary	0.086 (0.003)	0.058 (0.004)	2.8e−09
1920	mood swings	binary	0.097 (0.003)	0.067 (0.004)	1.6e−09
1930	miserableness	binary	0.087 (0.003)	0.062 (0.004)	3.1e−07
1950	sensitivity/hurt feelings	binary	0.083 (0.003)	0.057 (0.004)	5.7e−09
1970	nervous feelings	binary	0.108 (0.003)	0.077 (0.005)	6.2e−08
1980	worrier	binary	0.104 (0.003)	0.075 (0.004)	3.8e−08
2000	worry too long after embarrassment	binary	0.088 (0.003)	0.061 (0.004)	5.7e−10
2010	suffer from “nerves”	binary	0.071 (0.003)	0.052 (0.004)	3.2e−05
2020	loneliness, isolation	binary	0.070 (0.003)	0.044 (0.004)	2.9e−08
2030	guilty feelings	binary	0.076 (0.003)	0.054 (0.004)	6.8e−07
2040	risk taking	binary	0.085 (0.003)	0.064 (0.004)	6.6e−06
2188	long-standing illness, disability, or infirmity	binary	0.080 (0.003)	0.058 (0.004)	5.7e−07
2443	diabetes diagnosed by doctor	binary	0.207 (0.012)	0.136 (0.011)	8.4e−06
20160	ever smoked	binary	0.106 (0.003)	0.077 (0.004)	1.3e−08
6149$\_$100	mouth/teeth dental problems: none of the above	binary	0.053 (0.002)	0.038 (0.003)	1.0e−05
6149$\_$6	mouth/teeth dental problems: dentures	binary	0.110 (0.004)	0.080 (0.005)	7.3e−07
6150$\_$2	vascular/heart problems diagnosed by doctor: angina	binary	0.131 (0.008)	0.083 (0.010)	5.1e−05
30510$\_$irnt	creatinine (enzymatic) in urine	continuous$\_$irnt	0.057 (0.002)	0.041 (0.002)	3.2e−08
1160	sleep duration	ordinal	0.063 (0.002)	0.046 (0.002)	6.9e−09
1200	sleeplessness/insomnia	ordinal	0.054 (0.002)	0.040 (0.002)	3.3e−07

The estimates of heritability of binary traits have been transformed to liability scale.