Table 2.

Putative SNPs and InDels clearly differentiate mutant and wild type maize inbreds.

SNP	Type of mutation	Position (bp)	Location	Predicted function
SNPs
SNP1b	C to G	663	Promoter	Cis-acting regulatory element
SNP2a	C to T	1,907	Intron	Intron variant
SNP3a	A to G	2,610	Intron	Intron variant
SNP4b	T to G	2,611	Intron	Intron variant
SNP5a	A to G	4,393	3'UTR	3'UTR variant
InDel	Length (bp)	Position (bp)	Location	Predicted function
InDels
InDel1	2	680–681	Promoter	Transcription factor binding site
InDel2	1	4,392	3'UTR	3'UTR variant

^aTransitions;

^bTransversions.