TABLE 3.
Target group | DNA detected (ng) | % of 200 μl of purified DNA used for dot blot | Total DNA estimated for sample (fg g of sediment−1)a | Corrected DNA cell−1 for target group (fg)b | Estimated cells g of sediment−1 |
---|---|---|---|---|---|
General SRBc | 1,130 | 50 | 1.7 × 109 | 5.7 | 3.0 × 108 |
1,110 | 50 | 1.7 × 109 | 5.7 | 3.0 × 108 | |
1,160 | 50 | 1.8 × 109 | 5.7 | 3.2 × 108 | |
Desulfococcus spp.c | 546 | 50 | 8.3 × 108 | 5.6 | 1.5 × 107 |
605 | 50 | 9.2 × 108 | 5.6 | 1.6 × 107 | |
628 | 50 | 9.5 × 108 | 5.6 | 1.7 × 107 | |
General eubacteriad | 14,006 | 4 | 2.7 × 1011 | 5.3 | 5.2 × 1010 |
General SRBd | 1,019 | 8 | 9.7 × 109 | 5.7 | 1.7 × 109 |
Desulfovibrio spp.d | 150 | 16 | 7.1 × 108 | 5.9 | 1.2 × 108 |
Desulfobacter spp.d | 168 | 16 | 8.1 × 108 | 3.1 | 2.6 × 108 |
Desulfobacterium spp. d | 161 | 16 | 7.6 × 108 | 6.5 | 1.2 × 108 |
Desulfococcus spp.d | 43 | 16 | 2.0 × 108 | 5.6 | 3.5 × 107 |
Desulfobulbus spp.d | 236 | 16 | 1.1 × 109 | 7.3 | 1.5 × 108 |
Based on extraction efficiency of 48%.
Values taken from Table 2.
Detected from replicate DNA preparations from one 2-g sample collected in June.
Detected from one 2-g sample collected in June.